BS20713.complete Sequence
512 bp assembled on 2011-01-18
GenBank Submission: KX804997
> BS20713.complete
GAAGTTATCAGTCGACATGGCTCAAGAAAATCAAGCTGTCGACAATGGAC
TGCCCTGCAACGCTTACCTGGACACAAGCCTGCGAGAGGACGAAAACATG
CAACACATCCTGAAAACCTTTTACAGCAGCATCGAACTCCTGGAAGCCGA
CACGGAGAAGGCACTGGCGCTACAGGCAGAACGCACATTGAACACAAATG
AACAAATAAAATTGGATAGCTACCTTGTGTACTTGAACAGCACACTGTTT
TTCATATACCTGAAACTGCAGGGTGAAGATGCCTCAAATCATGCTGTGAT
GCACGATTTGCGTCGTACAAGGGACCTACTTGCCCGCGATAAGAAAATAA
ACGATGCTCTAGCGGCGCCAAGACTGGATATGCCCGCTGCCAAGCGATTT
ATCGCAGCTGGAACCCACACACGATTTGTGGACATGAACGGAGTTATGGT
CTCCGAAAAACAATATAATAAAAGCAAGCAAGAAACTCCCAAATAAAAGC
TTTCTAGACCAT
BS20713.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:06:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rrp47-RB | 480 | CG8928-PB | 1..480 | 17..496 | 2400 | 100 | Plus |
| Rrp47-RA | 480 | CG8928-PA | 1..480 | 17..496 | 2400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:06:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rrp47-RB | 1285 | CG8928-RB | 158..639 | 15..496 | 2410 | 100 | Plus |
| Rrp47-RA | 842 | CG8928-RA | 77..558 | 15..496 | 2410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:06:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15945054..15945328 | 15..289 | 1375 | 100 | Plus |
| X | 23542271 | X | 15945397..15945603 | 290..496 | 1035 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 16:06:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Galileo | 2304 | Dbuz\Galileo GALILEO 2304bp | 1746..1786 | 167..207 | 106 | 73.2 | Plus |
BS20713.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:29 Download gff for
BS20713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8928-RA | 46..523 | 17..494 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:47:59 Download gff for
BS20713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rrp47-RA | 79..556 | 17..494 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:56:28 Download gff for
BS20713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rrp47-RA | 79..556 | 17..494 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:56:28 Download gff for
BS20713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15945056..15945328 | 17..289 | 100 | -> | Plus |
| X | 15945397..15945601 | 290..494 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:47:59 Download gff for
BS20713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15839089..15839361 | 17..289 | 100 | -> | Plus |
| arm_X | 15839430..15839634 | 290..494 | 100 | | Plus |
BS20713.pep Sequence
Translation from 16 to 495
> BS20713.pep
MAQENQAVDNGLPCNAYLDTSLREDENMQHILKTFYSSIELLEADTEKAL
ALQAERTLNTNEQIKLDSYLVYLNSTLFFIYLKLQGEDASNHAVMHDLRR
TRDLLARDKKINDALAAPRLDMPAAKRFIAAGTHTRFVDMNGVMVSEKQY
NKSKQETPK*
BS20713.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:59:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rrp47-PB | 159 | CG8928-PB | 1..159 | 1..159 | 806 | 100 | Plus |
| Rrp47-PA | 159 | CG8928-PA | 1..159 | 1..159 | 806 | 100 | Plus |
