BS20715.complete Sequence
464 bp assembled on 2011-01-18
GenBank Submission: KX804630
> BS20715.complete
GAAGTTATCAGTCGACATGAGCACCGAATCGGCGAAGCCGGCACTCAGCC
AGGAGGCCATTGTGGCCCAGTTCCAACAGCTGCGCAATGAGCAGCGCAAT
TTGGTCAACAGTTTAAATACGCTCGAAATGGATTTGAGGGAACACAAAAC
TGTGATAGAAACTCTGGAGGCGGCGGATCCCGAACGGAAATGCTTTCGTC
AAATTGGTGGTGTGCTGTGCGAAAGGACCGTGAAGGAGGTGCTGCCACAG
CTGGTGGAGAACAAGGATTTCATCGCCAAGACCATCCAAATGGTCACCAA
TGACCTGAGCAAAAAGGGCAGTGAGCTGAACAAGTTCAAGGAGGAGCACA
ATATCAAGATTCGCGGCGAACACTTGGTTGCCGAAGGAGCCAAGGGCGAC
GATGCGGAGGACAAGGCGGAGAACCGTAATGTCCTGGTGTTCAACTGAAA
GCTTTCTAGACCAT
BS20715.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:06:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(3)01239-RB | 432 | CG6302-PB | 1..432 | 17..448 | 2160 | 100 | Plus |
l(3)01239-RA | 432 | CG6302-PA | 1..432 | 17..448 | 2160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:06:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(3)01239-RB | 993 | CG6302-RB | 143..578 | 17..452 | 2165 | 99.8 | Plus |
l(3)01239-RA | 819 | CG6302-RA | 143..578 | 17..452 | 2165 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:06:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11073707..11074011 | 452..148 | 1510 | 99.7 | Minus |
3L | 28110227 | 3L | 11074116..11074246 | 147..17 | 655 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:06:43 has no hits.
BS20715.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:30 Download gff for
BS20715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(3)01239-RA | 145..575 | 17..447 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:03 Download gff for
BS20715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(3)01239-RA | 143..573 | 17..447 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:56:33 Download gff for
BS20715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(3)01239-RA | 143..573 | 17..447 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:56:33 Download gff for
BS20715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11073712..11074011 | 148..447 | 100 | <- | Minus |
3L | 11074116..11074246 | 17..147 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:03 Download gff for
BS20715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11066812..11067111 | 148..447 | 100 | <- | Minus |
arm_3L | 11067216..11067346 | 17..147 | 100 | | Minus |
BS20715.pep Sequence
Translation from 16 to 447
> BS20715.pep
MSTESAKPALSQEAIVAQFQQLRNEQRNLVNSLNTLEMDLREHKTVIETL
EAADPERKCFRQIGGVLCERTVKEVLPQLVENKDFIAKTIQMVTNDLSKK
GSELNKFKEEHNIKIRGEHLVAEGAKGDDAEDKAENRNVLVFN*
BS20715.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:59:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(3)01239-PB | 143 | CG6302-PB | 1..143 | 1..143 | 718 | 100 | Plus |
l(3)01239-PA | 143 | CG6302-PA | 1..143 | 1..143 | 718 | 100 | Plus |