BS20718.complete Sequence
416 bp assembled on 2011-01-18
GenBank Submission: KX804920
> BS20718.complete
GAAGTTATCAGTCGACATGAACAAATTCTTCGTCCTTGCCGTCGCCGCCC
TGGCTGTTTCCTGTGTCCAGGCCGACTCCTTCGACGCCCGAGCCGAGACT
CGCGAGTATAAGAGCGACCTGAAGGAGGATGGCAGCTATGCCTATCAGTA
CCAGACGTCCAATGGCATCGCTGGCCAGGAATCGGGCGTGGGTGGTTACT
ATGCCAGCGGCTCGAACGCCTACTACGCCCCCGATGGCCAGCTCATCCAG
TTGACCTACACCGCCGACAGCAATGGCTACCACCCGGCCGGCGCCCATCT
GCCCACACCTCCTCCAATCCCGGCTTCCATCCTGAAGTCACTGGAGTACA
TCCGCACCCATCCCCAGCAGGAGAGTCGCCAGGGTCAAGGACGATTCTAG
AAGCTTTCTAGACCAT
BS20718.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:07:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr65Ec-RA | 384 | CG8634-PA | 1..384 | 17..400 | 1920 | 100 | Plus |
| Cpr65Eb-RA | 540 | CG8638-PA | 122..359 | 123..360 | 275 | 74.4 | Plus |
| Cpr67Fa1-RA | 405 | CG7941-PA | 286..353 | 299..366 | 205 | 86.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr65Ec-RA | 566 | CG8634-RA | 81..465 | 17..401 | 1925 | 100 | Plus |
| Cpr65Eb-RA | 1004 | CG8638-RA | 200..437 | 123..360 | 275 | 74.4 | Plus |
| Cpr67Fa1-RA | 554 | CG7941-RA | 345..412 | 299..366 | 205 | 86.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:06:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7093368..7093740 | 29..401 | 1865 | 100 | Plus |
| 3L | 28110227 | 3L | 7088280..7088517 | 360..123 | 275 | 74.4 | Minus |
| 3L | 28110227 | 3L | 10890491..10890558 | 299..366 | 205 | 86.8 | Plus |
| 3L | 28110227 | 3L | 10892291..10892359 | 299..367 | 180 | 84.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:06:59 has no hits.
BS20718.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:32 Download gff for
BS20718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr65Ec-RA | 76..459 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:08 Download gff for
BS20718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr65Ec-RA | 81..464 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:56:37 Download gff for
BS20718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr65Ec-RA | 81..464 | 17..400 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:56:37 Download gff for
BS20718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7093368..7093739 | 29..400 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:08 Download gff for
BS20718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7086468..7086839 | 29..400 | 100 | | Plus |
BS20718.pep Sequence
Translation from 16 to 399
> BS20718.pep
MNKFFVLAVAALAVSCVQADSFDARAETREYKSDLKEDGSYAYQYQTSNG
IAGQESGVGGYYASGSNAYYAPDGQLIQLTYTADSNGYHPAGAHLPTPPP
IPASILKSLEYIRTHPQQESRQGQGRF*
BS20718.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:59:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr65Ec-PA | 127 | CG8634-PA | 1..127 | 1..127 | 666 | 100 | Plus |
| Cpr65Eb-PA | 179 | CG8638-PA | 1..124 | 1..119 | 374 | 62.1 | Plus |
| Cpr67Fa2-PA | 134 | CG18349-PA | 1..118 | 1..117 | 336 | 54.2 | Plus |
| Cpr67Fa1-PA | 134 | CG7941-PA | 2..118 | 4..117 | 335 | 53.8 | Plus |
| Cpr67Fb-PA | 122 | CG18348-PA | 6..116 | 7..118 | 334 | 57.1 | Plus |
