BS20722.complete Sequence
659 bp assembled on 2011-01-18
GenBank Submission: KX802861
> BS20722.complete
GAAGTTATCAGTCGACATGGGTGCTTGTCGCCCTAGAAAATGTAGTGCAA
ATAACCGAACTATGGCAATTCGTCGCCGTAGAGCTCTAGTTAACTTGCTA
TTTTTGCGCCGTCATTTGATTGGACAGGCACTTGGAATTACGAATCGGGA
AACTCCAGACCTTAGGGTAAAATCGCGGCGACGCAATCGTAGAAGGAGAA
TGCAATTCAGAGTCCGTACACCAAGTGATAATGCAATGCGCTCAGTAAGG
CATCATGGACAGAATCCAATCAGCCCAGGATCACGGCTACAACGAAATAA
TCCACTTTGGGGACACGCCGACATTATAACCACAGATAGAGCGTTGGAAG
CTTTAAATGGACTTACTACAGGGAACAGGGAACCAAATGCATTGTCAGTA
ATGGTGCGATATACCAATGGGCGGTATTATTTAAGCTTAGAGCCAAGTGG
AAATCAGCAAAATGAGAACAATATCGTTCAAAATCCCAGTCGGAATGGTC
AGAACCAACAGGTCGAAGACGGCAATGATCGGAATCTTCAACCGGCAGCT
CAGGCAGCTGATGATGATAACAATATGACAAATTCAAATCCGGAGGTTCC
AGATGTCGGAGGCAAATCAGAAGGATCAAGGGAATGCCCATGAAAGCTTT
CTAGACCAT
BS20722.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:06:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31709-RB | 627 | CG31709-PB | 1..627 | 17..643 | 3135 | 100 | Plus |
| CG31709-RA | 627 | CG31709-PA | 1..627 | 17..643 | 3135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:06:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31709-RB | 1395 | CG31709-RB | 75..701 | 17..643 | 3135 | 100 | Plus |
| CG31709-RA | 960 | CG31709-RA | 75..701 | 17..643 | 3135 | 100 | Plus |
| gcm-RB | 2173 | CG12245-RB | 2107..2160 | 17..70 | 270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:06:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9579093..9579447 | 425..71 | 1775 | 100 | Minus |
| 2L | 23513712 | 2L | 9578814..9579031 | 643..426 | 1090 | 100 | Minus |
| 2L | 23513712 | 2L | 9579511..9579564 | 70..17 | 270 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:06:26 has no hits.
BS20722.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:28 Download gff for
BS20722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31709-RA | 75..700 | 17..642 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:47:57 Download gff for
BS20722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31709-RA | 75..700 | 17..642 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:56:26 Download gff for
BS20722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31709-RA | 75..700 | 17..642 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:56:26 Download gff for
BS20722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9578815..9579031 | 426..642 | 100 | <- | Minus |
| 2L | 9579093..9579447 | 71..425 | 100 | <- | Minus |
| 2L | 9579511..9579564 | 17..70 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:47:57 Download gff for
BS20722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9578815..9579031 | 426..642 | 100 | <- | Minus |
| arm_2L | 9579093..9579447 | 71..425 | 100 | <- | Minus |
| arm_2L | 9579511..9579564 | 17..70 | 100 | | Minus |
BS20722.pep Sequence
Translation from 16 to 642
> BS20722.pep
MGACRPRKCSANNRTMAIRRRRALVNLLFLRRHLIGQALGITNRETPDLR
VKSRRRNRRRRMQFRVRTPSDNAMRSVRHHGQNPISPGSRLQRNNPLWGH
ADIITTDRALEALNGLTTGNREPNALSVMVRYTNGRYYLSLEPSGNQQNE
NNIVQNPSRNGQNQQVEDGNDRNLQPAAQAADDDNNMTNSNPEVPDVGGK
SEGSRECP*
BS20722.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:59:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31709-PB | 208 | CG31709-PB | 1..208 | 1..208 | 1095 | 100 | Plus |
| CG31709-PA | 208 | CG31709-PA | 1..208 | 1..208 | 1095 | 100 | Plus |
