Clone BS20724 Report

Search the DGRC for BS20724

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:207
Well:24
Vector:pDNR-Dual
Associated Gene/TranscriptCG1850-RA
Protein status:BS20724.pep: full length peptide match
Sequenced Size:2078

Clone Sequence Records

BS20724.complete Sequence

2078 bp assembled on 2011-02-17

GenBank Submission: KX804369

> BS20724.complete
GAAGTTATCAGTCGACATGCGGCTATTTCTGATCGGCTTGCTGGCCCTGG
GTTCCGCGAGGGCCTTCTCTGTGATCCGCACCCAGCCGCATCCGCAGCTG
GTGGCCTACGCTCCGGCCAGAGGCGAGTTCCCAGTGGTGAGTGGCCTAGC
CCAGGGCTACGTCCGCTACTACGATGGCACCGGAGCAGAGCGACTGCTGC
CTTACAACTACCCGGAACCGCTGAACGGCATCCGGGATCTGTCCACCTCT
AGTCTAGTCCGCTCCGGTGAGGAGCAAGAGAGCCAACAGATCGCTCTGTT
CCGTGCCTGGTGCGAGCAGCGCTACCAGGCCATGCGCGTAGAACTGGATC
GCCTGAAGGCCCAGGGCCTGAAACCCACACCCAGCATGCTGGCTCAGTTC
GAGCCTCTGGAGCAGATCGTCAAGTTTTCCGCCTTCGAAGCCGTTCCCGG
ACTGACCCCGGAGGTCCAGCGCGCCCGGGATGAGCAGCTACGCATCTGGA
ACGAGGCCAGGCTGGAGGTGCTGCGCGCCGAACAGGCTCAGCAGCTGCTC
GGCCAGTCCCCGGAGTACCAGTACGAGAAGGAAAAGATCCCTGTCATGTA
CGCCCAGCCTATGCAGCAGCAGATTGTTCCATACCAGGAGAACATATTGA
TCAAAACCACCACTCAAGATGCGCCTCAACCCATTGAGGAGACACCGGAA
GTGAAATTGGCCCGCCAGGAACATCTGAAGCAGTTCAACGAGGCCCTCCT
CCGGCAGCCTGCCCAGGAAGCCATCATCCTTAAAGCCGTTCCTGGAATTA
AGCAGCCAATCGCGAGCCAGCCTCAGCCGATCATCAAGAGCACCACAACC
ATCTTTGAGACCCAGCCAGCTGCCCAACCCCAGGGAATATTCCAGAGGGG
CAGCTTCACAGATCAGCAGACCCCACAGCCCATCGACGAAACTCCAGAAG
TGAAAAAAGCTCGCGAGGAGCACCTCAAGCTGTTCAATGAGGCCTTGCTC
CGTCAAACTACTGCCCCCGCAGAACCCACTCTTAAGGCGACGACCACTAA
GAACGATCAGCCCCAAGCATTCACCTTCCCAGAAAAAAAAGCTCCTCAAC
CTATCCAGGAAACTCCAGAGGTCGTGCGCGCTCGGGAGGAGCATCTGAAG
CAGTTCAACGAGGCCATCCTGCGGCAGCCAGTCGACATCCAACAACAGCC
CCTGATTGCAACCGCACCGTTTGCTCCTCAACCCATTTTTAAGAGCCCCA
TTGCCGAGGTACCACAGCCCGTCCAGGACACTCCGGAAGTCAAGCTGGCA
CGTGAGCAGCACCTGCTGCTACTCAACCAAGCGAAAGTACAGGCCGAGGA
CAAGGTGGCCGACATTGCCGACATGATCCGATTGGAGGAGCGCGAGCAGG
AGAAGGAGCGTCTGCAGGAGCTGGAACTGCGCAAGCAGGAGGAGAAGGAA
GCCGAAATGGAACGCCAGAAGGAGGCAGATCGTCGGCTCGAGGAAACCCG
CATTCTGGAGGCCGAGCGTCTAAAGATCGAGCAAGAAGATCGCCAGCGGT
TGGAGAGTGAAAAGCAGGAGCTCCTCCAGTTGAAGGCCACCTCCGCAGCC
ACCGTACCCGAGAAGGACACTCCTGAATATCTGCGCAAGGCGGAGCAGTT
CAAGATCATCAACAACCAGGTGCAGCCCCAGCAGCAGCCCAACATCGTGA
CCCAGCAGCAGCAAGTGCAAAATGGCTTCTTCCTGCGCATCCAAACCAAC
CAGCCCAACGCCATCCAGCCATCCACGGTCCCAGTGAGCACTCCTGCCCT
AGTTCTAGCCGAGCCGGGCTCCAATCCCTTCCTGGTTCGATACACCACCA
AGTCAGCAGCGCGGCCGCTTCCTCTGCAGACGCTTCAGCCCCTGCCCACT
CCCATTGCCTCCGAATTGAAGCAGCAGGTCACATACAGCTCCACGTCGTC
CAGTGAACTGGACAAAGCCACCCGGGAGCACTTCCGCGCCCACGAGATCG
CCCTGGAGCAGCTGCGTCTGGCCAACCTGCGGAATCCCTGGACCCCCGAC
TGCCAGCACTAGAAGCTTTCTAGACCAT

BS20724.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:01:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG1850-RA 2046 CG1850-PA 1..2046 17..2062 10230 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:01:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG1850-RA 2403 CG1850-RA 132..2177 17..2062 10230 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:01:06
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7259093..7261138 2062..17 10230 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:01:07 has no hits.

BS20724.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-17 10:41:37 Download gff for BS20724.complete
Subject Subject Range Query Range Percent Splice Strand
CG1850-RA 114..2159 17..2062 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:31 Download gff for BS20724.complete
Subject Subject Range Query Range Percent Splice Strand
CG1850-RA 132..2177 17..2062 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:00:55 Download gff for BS20724.complete
Subject Subject Range Query Range Percent Splice Strand
CG1850-RA 132..2177 17..2062 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:00:55 Download gff for BS20724.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7259093..7261138 17..2062 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:31 Download gff for BS20724.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3146598..3148643 17..2062 100   Minus

BS20724.pep Sequence

Translation from 16 to 2061

> BS20724.pep
MRLFLIGLLALGSARAFSVIRTQPHPQLVAYAPARGEFPVVSGLAQGYVR
YYDGTGAERLLPYNYPEPLNGIRDLSTSSLVRSGEEQESQQIALFRAWCE
QRYQAMRVELDRLKAQGLKPTPSMLAQFEPLEQIVKFSAFEAVPGLTPEV
QRARDEQLRIWNEARLEVLRAEQAQQLLGQSPEYQYEKEKIPVMYAQPMQ
QQIVPYQENILIKTTTQDAPQPIEETPEVKLARQEHLKQFNEALLRQPAQ
EAIILKAVPGIKQPIASQPQPIIKSTTTIFETQPAAQPQGIFQRGSFTDQ
QTPQPIDETPEVKKAREEHLKLFNEALLRQTTAPAEPTLKATTTKNDQPQ
AFTFPEKKAPQPIQETPEVVRAREEHLKQFNEAILRQPVDIQQQPLIATA
PFAPQPIFKSPIAEVPQPVQDTPEVKLAREQHLLLLNQAKVQAEDKVADI
ADMIRLEEREQEKERLQELELRKQEEKEAEMERQKEADRRLEETRILEAE
RLKIEQEDRQRLESEKQELLQLKATSAATVPEKDTPEYLRKAEQFKIINN
QVQPQQQPNIVTQQQQVQNGFFLRIQTNQPNAIQPSTVPVSTPALVLAEP
GSNPFLVRYTTKSAARPLPLQTLQPLPTPIASELKQQVTYSSTSSSELDK
ATREHFRAHEIALEQLRLANLRNPWTPDCQH*

BS20724.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:18:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG1850-PA 681 CG1850-PA 1..681 1..681 3452 100 Plus
ptip-PA 2294 CG32133-PA 776..1361 62..665 197 19.2 Plus