BS20724.complete Sequence
2078 bp assembled on 2011-02-17
GenBank Submission: KX804369
> BS20724.complete
GAAGTTATCAGTCGACATGCGGCTATTTCTGATCGGCTTGCTGGCCCTGG
GTTCCGCGAGGGCCTTCTCTGTGATCCGCACCCAGCCGCATCCGCAGCTG
GTGGCCTACGCTCCGGCCAGAGGCGAGTTCCCAGTGGTGAGTGGCCTAGC
CCAGGGCTACGTCCGCTACTACGATGGCACCGGAGCAGAGCGACTGCTGC
CTTACAACTACCCGGAACCGCTGAACGGCATCCGGGATCTGTCCACCTCT
AGTCTAGTCCGCTCCGGTGAGGAGCAAGAGAGCCAACAGATCGCTCTGTT
CCGTGCCTGGTGCGAGCAGCGCTACCAGGCCATGCGCGTAGAACTGGATC
GCCTGAAGGCCCAGGGCCTGAAACCCACACCCAGCATGCTGGCTCAGTTC
GAGCCTCTGGAGCAGATCGTCAAGTTTTCCGCCTTCGAAGCCGTTCCCGG
ACTGACCCCGGAGGTCCAGCGCGCCCGGGATGAGCAGCTACGCATCTGGA
ACGAGGCCAGGCTGGAGGTGCTGCGCGCCGAACAGGCTCAGCAGCTGCTC
GGCCAGTCCCCGGAGTACCAGTACGAGAAGGAAAAGATCCCTGTCATGTA
CGCCCAGCCTATGCAGCAGCAGATTGTTCCATACCAGGAGAACATATTGA
TCAAAACCACCACTCAAGATGCGCCTCAACCCATTGAGGAGACACCGGAA
GTGAAATTGGCCCGCCAGGAACATCTGAAGCAGTTCAACGAGGCCCTCCT
CCGGCAGCCTGCCCAGGAAGCCATCATCCTTAAAGCCGTTCCTGGAATTA
AGCAGCCAATCGCGAGCCAGCCTCAGCCGATCATCAAGAGCACCACAACC
ATCTTTGAGACCCAGCCAGCTGCCCAACCCCAGGGAATATTCCAGAGGGG
CAGCTTCACAGATCAGCAGACCCCACAGCCCATCGACGAAACTCCAGAAG
TGAAAAAAGCTCGCGAGGAGCACCTCAAGCTGTTCAATGAGGCCTTGCTC
CGTCAAACTACTGCCCCCGCAGAACCCACTCTTAAGGCGACGACCACTAA
GAACGATCAGCCCCAAGCATTCACCTTCCCAGAAAAAAAAGCTCCTCAAC
CTATCCAGGAAACTCCAGAGGTCGTGCGCGCTCGGGAGGAGCATCTGAAG
CAGTTCAACGAGGCCATCCTGCGGCAGCCAGTCGACATCCAACAACAGCC
CCTGATTGCAACCGCACCGTTTGCTCCTCAACCCATTTTTAAGAGCCCCA
TTGCCGAGGTACCACAGCCCGTCCAGGACACTCCGGAAGTCAAGCTGGCA
CGTGAGCAGCACCTGCTGCTACTCAACCAAGCGAAAGTACAGGCCGAGGA
CAAGGTGGCCGACATTGCCGACATGATCCGATTGGAGGAGCGCGAGCAGG
AGAAGGAGCGTCTGCAGGAGCTGGAACTGCGCAAGCAGGAGGAGAAGGAA
GCCGAAATGGAACGCCAGAAGGAGGCAGATCGTCGGCTCGAGGAAACCCG
CATTCTGGAGGCCGAGCGTCTAAAGATCGAGCAAGAAGATCGCCAGCGGT
TGGAGAGTGAAAAGCAGGAGCTCCTCCAGTTGAAGGCCACCTCCGCAGCC
ACCGTACCCGAGAAGGACACTCCTGAATATCTGCGCAAGGCGGAGCAGTT
CAAGATCATCAACAACCAGGTGCAGCCCCAGCAGCAGCCCAACATCGTGA
CCCAGCAGCAGCAAGTGCAAAATGGCTTCTTCCTGCGCATCCAAACCAAC
CAGCCCAACGCCATCCAGCCATCCACGGTCCCAGTGAGCACTCCTGCCCT
AGTTCTAGCCGAGCCGGGCTCCAATCCCTTCCTGGTTCGATACACCACCA
AGTCAGCAGCGCGGCCGCTTCCTCTGCAGACGCTTCAGCCCCTGCCCACT
CCCATTGCCTCCGAATTGAAGCAGCAGGTCACATACAGCTCCACGTCGTC
CAGTGAACTGGACAAAGCCACCCGGGAGCACTTCCGCGCCCACGAGATCG
CCCTGGAGCAGCTGCGTCTGGCCAACCTGCGGAATCCCTGGACCCCCGAC
TGCCAGCACTAGAAGCTTTCTAGACCAT
BS20724.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:01:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1850-RA | 2046 | CG1850-PA | 1..2046 | 17..2062 | 10230 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:01:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1850-RA | 2403 | CG1850-RA | 132..2177 | 17..2062 | 10230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:01:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7259093..7261138 | 2062..17 | 10230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:01:07 has no hits.
BS20724.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-17 10:41:37 Download gff for
BS20724.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1850-RA | 114..2159 | 17..2062 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:31 Download gff for
BS20724.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1850-RA | 132..2177 | 17..2062 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:00:55 Download gff for
BS20724.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1850-RA | 132..2177 | 17..2062 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:00:55 Download gff for
BS20724.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7259093..7261138 | 17..2062 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:31 Download gff for
BS20724.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3146598..3148643 | 17..2062 | 100 | | Minus |
BS20724.pep Sequence
Translation from 16 to 2061
> BS20724.pep
MRLFLIGLLALGSARAFSVIRTQPHPQLVAYAPARGEFPVVSGLAQGYVR
YYDGTGAERLLPYNYPEPLNGIRDLSTSSLVRSGEEQESQQIALFRAWCE
QRYQAMRVELDRLKAQGLKPTPSMLAQFEPLEQIVKFSAFEAVPGLTPEV
QRARDEQLRIWNEARLEVLRAEQAQQLLGQSPEYQYEKEKIPVMYAQPMQ
QQIVPYQENILIKTTTQDAPQPIEETPEVKLARQEHLKQFNEALLRQPAQ
EAIILKAVPGIKQPIASQPQPIIKSTTTIFETQPAAQPQGIFQRGSFTDQ
QTPQPIDETPEVKKAREEHLKLFNEALLRQTTAPAEPTLKATTTKNDQPQ
AFTFPEKKAPQPIQETPEVVRAREEHLKQFNEAILRQPVDIQQQPLIATA
PFAPQPIFKSPIAEVPQPVQDTPEVKLAREQHLLLLNQAKVQAEDKVADI
ADMIRLEEREQEKERLQELELRKQEEKEAEMERQKEADRRLEETRILEAE
RLKIEQEDRQRLESEKQELLQLKATSAATVPEKDTPEYLRKAEQFKIINN
QVQPQQQPNIVTQQQQVQNGFFLRIQTNQPNAIQPSTVPVSTPALVLAEP
GSNPFLVRYTTKSAARPLPLQTLQPLPTPIASELKQQVTYSSTSSSELDK
ATREHFRAHEIALEQLRLANLRNPWTPDCQH*
BS20724.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:18:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1850-PA | 681 | CG1850-PA | 1..681 | 1..681 | 3452 | 100 | Plus |
ptip-PA | 2294 | CG32133-PA | 776..1361 | 62..665 | 197 | 19.2 | Plus |