BS20727.complete Sequence
623 bp assembled on 2011-01-18
GenBank Submission: KX800369
> BS20727.complete
GAAGTTATCAGTCGACATGTCGACAAACCCAAGTCCGCAGCGGCAACAGT
CCGAGGACGTTCAGATCTCGATGGCCAGTTCCGGAGGAGGAGCCGGCAAT
GGCGTTCCGGATAGACTGCCTCCGATCAACGTAAAGGACCAACGCTTCCC
CTACTGCATCGTTTGGACTCCCATTCCGGTTCTCACCTGGCTGATGCCCA
TGATCGGACATATGGGCATTTGCACTTCGTCCGGTGTGATTCGTGACTTC
GCCGGCCCCTACTTCGTATCAGAGGACAACATGGCCTTTGGAAGACCCAC
CCGGTACATAAGGTTGCACCCCAAGCACATGGTGGGCGGCAGTTACGCCT
GGGACGAGGCGGTCTCCAAAGCATCTGTGCTCTACGGCACCCGCATCCAC
AATATCTTCTGTGACAACTGCCACTCGCATGTGGCAACGGCACTCATCTA
CATGCGCTACTACGACAGCACCGCATGGAACATGATTATCCTCAGCATGT
GGCTCTTTGTCTGCGGCCGCTACGTCGGAATAGGGGGTTTTATTAAGACC
TGGCTGCCGTTTGCCATTCTCCTGTCCATCTTCACCATTCTGGGCATCTA
TTTTTAAAAGCTTTCTAGACCAT
BS20727.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:06:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8372-RB | 591 | CG8372-PB | 1..591 | 17..607 | 2955 | 100 | Plus |
CG8372-RA | 537 | CG8372-PA | 1..537 | 71..607 | 2685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:06:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8372-RB | 864 | CG8372-RB | 194..784 | 17..607 | 2955 | 100 | Plus |
CG8372-RA | 790 | CG8372-RA | 137..710 | 34..607 | 2870 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:06:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8212119..8212709 | 607..17 | 2955 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:06:06 has no hits.
BS20727.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:26 Download gff for
BS20727.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8372-RB | 173..761 | 17..605 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:47:49 Download gff for
BS20727.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8372-RB | 194..782 | 17..605 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:56:18 Download gff for
BS20727.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8372-RB | 194..782 | 17..605 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:56:18 Download gff for
BS20727.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8212121..8212709 | 17..605 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:47:49 Download gff for
BS20727.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8212121..8212709 | 17..605 | 100 | | Minus |
BS20727.pep Sequence
Translation from 16 to 606
> BS20727.pep
MSTNPSPQRQQSEDVQISMASSGGGAGNGVPDRLPPINVKDQRFPYCIVW
TPIPVLTWLMPMIGHMGICTSSGVIRDFAGPYFVSEDNMAFGRPTRYIRL
HPKHMVGGSYAWDEAVSKASVLYGTRIHNIFCDNCHSHVATALIYMRYYD
STAWNMIILSMWLFVCGRYVGIGGFIKTWLPFAILLSIFTILGIYF*
BS20727.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:59:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8372-PB | 196 | CG8372-PB | 1..196 | 1..196 | 1072 | 100 | Plus |
CG8372-PA | 178 | CG8372-PA | 1..178 | 19..196 | 982 | 100 | Plus |