Clone BS20727 Report

Search the DGRC for BS20727

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:207
Well:27
Vector:pDNR-Dual
Associated Gene/TranscriptCG8372-RB
Protein status:BS20727.pep: full length peptide match
Sequenced Size:623

Clone Sequence Records

BS20727.complete Sequence

623 bp assembled on 2011-01-18

GenBank Submission: KX800369

> BS20727.complete
GAAGTTATCAGTCGACATGTCGACAAACCCAAGTCCGCAGCGGCAACAGT
CCGAGGACGTTCAGATCTCGATGGCCAGTTCCGGAGGAGGAGCCGGCAAT
GGCGTTCCGGATAGACTGCCTCCGATCAACGTAAAGGACCAACGCTTCCC
CTACTGCATCGTTTGGACTCCCATTCCGGTTCTCACCTGGCTGATGCCCA
TGATCGGACATATGGGCATTTGCACTTCGTCCGGTGTGATTCGTGACTTC
GCCGGCCCCTACTTCGTATCAGAGGACAACATGGCCTTTGGAAGACCCAC
CCGGTACATAAGGTTGCACCCCAAGCACATGGTGGGCGGCAGTTACGCCT
GGGACGAGGCGGTCTCCAAAGCATCTGTGCTCTACGGCACCCGCATCCAC
AATATCTTCTGTGACAACTGCCACTCGCATGTGGCAACGGCACTCATCTA
CATGCGCTACTACGACAGCACCGCATGGAACATGATTATCCTCAGCATGT
GGCTCTTTGTCTGCGGCCGCTACGTCGGAATAGGGGGTTTTATTAAGACC
TGGCTGCCGTTTGCCATTCTCCTGTCCATCTTCACCATTCTGGGCATCTA
TTTTTAAAAGCTTTCTAGACCAT

BS20727.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:06:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG8372-RB 591 CG8372-PB 1..591 17..607 2955 100 Plus
CG8372-RA 537 CG8372-PA 1..537 71..607 2685 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:06:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG8372-RB 864 CG8372-RB 194..784 17..607 2955 100 Plus
CG8372-RA 790 CG8372-RA 137..710 34..607 2870 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:06:05
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8212119..8212709 607..17 2955 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:06:06 has no hits.

BS20727.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:26 Download gff for BS20727.complete
Subject Subject Range Query Range Percent Splice Strand
CG8372-RB 173..761 17..605 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:47:49 Download gff for BS20727.complete
Subject Subject Range Query Range Percent Splice Strand
CG8372-RB 194..782 17..605 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:56:18 Download gff for BS20727.complete
Subject Subject Range Query Range Percent Splice Strand
CG8372-RB 194..782 17..605 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:56:18 Download gff for BS20727.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8212121..8212709 17..605 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:47:49 Download gff for BS20727.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8212121..8212709 17..605 100   Minus

BS20727.pep Sequence

Translation from 16 to 606

> BS20727.pep
MSTNPSPQRQQSEDVQISMASSGGGAGNGVPDRLPPINVKDQRFPYCIVW
TPIPVLTWLMPMIGHMGICTSSGVIRDFAGPYFVSEDNMAFGRPTRYIRL
HPKHMVGGSYAWDEAVSKASVLYGTRIHNIFCDNCHSHVATALIYMRYYD
STAWNMIILSMWLFVCGRYVGIGGFIKTWLPFAILLSIFTILGIYF*

BS20727.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:59:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG8372-PB 196 CG8372-PB 1..196 1..196 1072 100 Plus
CG8372-PA 178 CG8372-PA 1..178 19..196 982 100 Plus