BS20737.complete Sequence
1127 bp assembled on 2011-01-18
GenBank Submission: KX800167
> BS20737.complete
GAAGTTATCAGTCGACATGAGATCGATTGCCACCAACTCCCTGCTGCCAC
TGATTGTGGCCTTGCTGATCGCCGGTAGTAATGCCTCCCTCCCACGCAGG
GGCAGCAGAAATCAAAGCCAGAATCGCACCATGTCCGCTGGCAAGGCTTT
CAAGGTCCTGGTGACACATCCCGAGGTTCCCCAGGAGGGCATTGATCTGC
TGAAGGAGAACTGCGAGATCGTCCAGGTGCAGAGTGTTCCCATCAACCGG
GCGGAGCTGCTGGAGAAAATCCGTGGCGTGGATGGCGTTCTCTGGGGTGG
ACACGAACCCCTCAATGCCGAGGCCCTCGATGCTGCCGGTCCCCAGCTGA
AATCCATCTCCACCATGTCGGCGGGAATCGACTACGTCGATGTGCCGGAG
GTAAAGAGACGTAAGATCCCGCTGGGACACACGCCCACCGTTCTCAACAC
CGCCGTGGCCGATTTGGCAGTGGGTCTCCTGATCGCCGCCAGTCGCCGTT
TTCACGAGGGTCGCAAGACCATCGACAATGACAAGTGGGAAAACTACCAT
CTTAACTGGCTGTTGGGCCAGGATATTCGTGATTCCACCGTGGGATTCTA
CGGCTTTGGAGGCATTGGTCAGGCTATTGCCAAGCGTTTGTCTGGATTCG
ACATTGACAAGGTGCTGTACACCACCCGTCGTCGTGTTCACAAGGAGATC
GAGGAGGAGTTCAATGCCAAGAAAGTTGACTTCGATACCCTTCTGGCCGA
GAGTGACTTCGTAGTGATCGCTTCTCCTTTGACGAAGGACACACAGGGCG
TCTTTAATGCCACCGCCTTCAACAAGATGAAGCAGACTGCTGTGCTGGTT
AACATTGCCAGGGGCAAAATCGTCAACCAGGATGACCTCTACGAGGCTTT
GAAAGCCAACCGAATCTTTTCCGCCGGACTCGACGTCACGGATCCGGAAC
CATTGTCGCCCAAGGACAAGCTGCTGACGCTTGACAATGTTGTTGTCCTG
CCCCATATTGGATCCGCCACGAAGCGCACCCGTGCCGACATGTCCACCAT
TGCTGCCCATAATGTGCTCCGCGGTTTGGCTGGGGAGCCCATGTTGTCGC
CCGCCTACTAGAAGCTTTCTAGACCAT
BS20737.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:10:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9331-RL | 1095 | CG9331-PL | 1..1095 | 17..1111 | 5475 | 100 | Plus |
| CG9331-RA | 1095 | CG9331-PA | 1..1095 | 17..1111 | 5475 | 100 | Plus |
| CG9331-RI | 1095 | CG9331-PI | 92..1095 | 108..1111 | 5020 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9331-RL | 1346 | CG9331-RL | 138..1237 | 12..1111 | 5485 | 99.9 | Plus |
| CG9331-RG | 1369 | CG9331-RG | 161..1260 | 12..1111 | 5485 | 99.9 | Plus |
| CG9331-RA | 1244 | CG9331-RA | 36..1135 | 12..1111 | 5485 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20825571..20826087 | 12..528 | 2570 | 99.8 | Plus |
| 2L | 23513712 | 2L | 20826633..20826970 | 529..866 | 1690 | 100 | Plus |
| 2L | 23513712 | 2L | 20827032..20827157 | 867..992 | 630 | 100 | Plus |
| 2L | 23513712 | 2L | 20827496..20827615 | 992..1111 | 600 | 100 | Plus |
| 2L | 23513712 | 2L | 20831946..20832287 | 525..866 | 570 | 77.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:10:01 has no hits.
BS20737.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:53 Download gff for
BS20737.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9331-RG | 164..1258 | 17..1111 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:49:23 Download gff for
BS20737.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9331-RA | 41..1135 | 17..1111 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:42 Download gff for
BS20737.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9331-RA | 41..1135 | 17..1111 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:42 Download gff for
BS20737.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20827032..20827157 | 867..992 | 100 | -> | Plus |
| 2L | 20827497..20827615 | 993..1111 | 100 | | Plus |
| 2L | 20825576..20826087 | 17..528 | 100 | -> | Plus |
| 2L | 20826633..20826970 | 529..866 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:49:23 Download gff for
BS20737.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20827032..20827157 | 867..992 | 100 | -> | Plus |
| arm_2L | 20827497..20827615 | 993..1111 | 100 | | Plus |
| arm_2L | 20825576..20826087 | 17..528 | 100 | -> | Plus |
| arm_2L | 20826633..20826970 | 529..866 | 100 | -> | Plus |
BS20737.pep Sequence
Translation from 16 to 1110
> BS20737.pep
MRSIATNSLLPLIVALLIAGSNASLPRRGSRNQSQNRTMSAGKAFKVLVT
HPEVPQEGIDLLKENCEIVQVQSVPINRAELLEKIRGVDGVLWGGHEPLN
AEALDAAGPQLKSISTMSAGIDYVDVPEVKRRKIPLGHTPTVLNTAVADL
AVGLLIAASRRFHEGRKTIDNDKWENYHLNWLLGQDIRDSTVGFYGFGGI
GQAIAKRLSGFDIDKVLYTTRRRVHKEIEEEFNAKKVDFDTLLAESDFVV
IASPLTKDTQGVFNATAFNKMKQTAVLVNIARGKIVNQDDLYEALKANRI
FSAGLDVTDPEPLSPKDKLLTLDNVVVLPHIGSATKRTRADMSTIAAHNV
LRGLAGEPMLSPAY*
BS20737.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:01:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9331-PL | 364 | CG9331-PL | 1..364 | 1..364 | 1842 | 100 | Plus |
| CG9331-PA | 364 | CG9331-PA | 1..364 | 1..364 | 1842 | 100 | Plus |
| CG9331-PI | 364 | CG9331-PI | 32..364 | 32..364 | 1698 | 100 | Plus |
| CG9331-PH | 364 | CG9331-PH | 32..364 | 32..364 | 1698 | 100 | Plus |
| CG9331-PM | 364 | CG9331-PM | 32..364 | 32..364 | 1698 | 100 | Plus |
