BS20740.complete Sequence
815 bp assembled on 2011-01-18
GenBank Submission: KX803487
> BS20740.complete
GAAGTTATCAGTCGACATGAAAATCTTCGTGGCTATTTTGGCTTTTGTGG
CCGTTGCCAGTGCGGCTTCCATGGGCCAGCCCATTGAAACCCAGTCGATC
TCCAGCACGATTGTGGATGTGATCGAGGGCATTAAGGAGCAGATGCCCTG
TGGCTTTACCAGTGTCGGCCTGCCGCCATTGGCTCCTCTTAGAATTGACC
ATCAGGATATCAACATCGATAGCAGCGTGCTGAAGGCTCAGGGAACCATT
GATCACTTCCGCCTGAACGGTCTGAATGATTTTGATATCGATGAGATGAA
GGTCAACGCCATCACCAGCAAGGTGACCTACAAGTTCACTTTCCGCGACG
TGAACGTGGATACCCAATACGATTTGAGTGTGCTGCTAAAGAAGTACGGA
TTTACCATCAATCTGATCGGTGCCGGACATGCCAAATTCGCCATCAAGGA
TATGGTTATCTGGGGCACTATGAAGTACTCACTCGGCGTGATCAGCGGCA
ACCTGAAGCTGAAGTCATTGGAGGTCCGCACCCACTTGGGTGAGGTTGAT
TCCGAGATCGAGGGCATCCTGGGCGATGGCAGCATCAACGAGAAGATGAA
TGAGTACTTGGCCGAGGCCGTGGAGCTGGCCATCAATGAGAACGAAGATC
TGATTGCCGATACCATCGAGAGTATTGCCCTGCCCGCCGTCAACAGCGTT
CTGGACGACATCAGCATCGCCGAGATCATCTCCGGTGCCGGTGGTGATGG
TGAGGGTGGAGAGAAGGAGGCCTGCATTCCCCCCGAGTTCGAGTGGTAAA
AGCTTTCTAGACCAT
BS20740.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:10:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8997-RB | 783 | CG8997-PB | 1..783 | 17..799 | 3915 | 100 | Plus |
| CG8997-RA | 783 | CG8997-PA | 1..783 | 17..799 | 3915 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8997-RB | 1347 | CG8997-RB | 64..847 | 17..800 | 3920 | 100 | Plus |
| CG8997-RA | 885 | CG8997-RA | 64..847 | 17..800 | 3920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13844415..13845129 | 800..86 | 3575 | 100 | Minus |
| 2L | 23513712 | 2L | 13845193..13845262 | 86..17 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:10:07 has no hits.
BS20740.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:53 Download gff for
BS20740.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8997-RA | 48..828 | 17..797 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:49:25 Download gff for
BS20740.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8997-RA | 64..844 | 17..797 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:43 Download gff for
BS20740.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8997-RA | 64..844 | 17..797 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:43 Download gff for
BS20740.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13844418..13845128 | 87..797 | 100 | <- | Minus |
| 2L | 13845193..13845262 | 17..86 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:49:25 Download gff for
BS20740.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13844418..13845128 | 87..797 | 100 | <- | Minus |
| arm_2L | 13845193..13845262 | 17..86 | 100 | | Minus |
BS20740.pep Sequence
Translation from 16 to 798
> BS20740.pep
MKIFVAILAFVAVASAASMGQPIETQSISSTIVDVIEGIKEQMPCGFTSV
GLPPLAPLRIDHQDINIDSSVLKAQGTIDHFRLNGLNDFDIDEMKVNAIT
SKVTYKFTFRDVNVDTQYDLSVLLKKYGFTINLIGAGHAKFAIKDMVIWG
TMKYSLGVISGNLKLKSLEVRTHLGEVDSEIEGILGDGSINEKMNEYLAE
AVELAINENEDLIADTIESIALPAVNSVLDDISIAEIISGAGGDGEGGEK
EACIPPEFEW*
BS20740.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:01:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8997-PB | 260 | CG8997-PB | 1..260 | 1..260 | 1310 | 100 | Plus |
| CG8997-PA | 260 | CG8997-PA | 1..260 | 1..260 | 1310 | 100 | Plus |
| CG7953-PB | 297 | CG7953-PB | 63..296 | 36..260 | 356 | 34.5 | Plus |
| CG7953-PA | 297 | CG7953-PA | 63..296 | 36..260 | 356 | 34.5 | Plus |
| CG33306-PA | 244 | CG33306-PA | 7..238 | 5..239 | 321 | 30 | Plus |
