BS20743.complete Sequence
422 bp assembled on 2011-01-18
GenBank Submission: KX803660
> BS20743.complete
GAAGTTATCAGTCGACATGTTTGGCCCGCTGCAGATTATCGTTTTTGCCA
CTATCTTGGTGGCCGTGGCCATGGCCATGCAGCCACTGGAGGACAATGAG
CGAACCCATCATCTGAACCACAAGCGCCAGTTGTCGCAACAGCACCACCA
CCACCACCAAAAGCTCCAGGAGGTGAGGCATTCGGGCCATGATAGTCTGA
AACATGGTGGTTCCCACGTTAAGGAGCATCAAGCGCATCACTCTGAGCGA
AAGGCCAGGCAGAGCCACAAGGAGCCGGGCCACAAGAAGAGTCACCACCA
GAAGGAGCACCGCCAGCAGCAGGACAACCACACCCGCAAATCCCGATCGC
ATTCCAAGGGCAGCAAGCAGCATCACAAGCGGCACACGGGATCGCGTCGC
CACTAGAAGCTTTCTAGACCAT
BS20743.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:12:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34232-RB | 390 | CG34232-PB | 1..390 | 17..406 | 1950 | 100 | Plus |
CG34232-RC | 384 | CG34232-PC | 12..384 | 34..406 | 1865 | 100 | Plus |
CG34232-RA | 384 | CG34232-PA | 12..384 | 34..406 | 1865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:12:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34232-RB | 831 | CG34232-RB | 229..618 | 17..406 | 1950 | 100 | Plus |
CG34232-RC | 775 | CG34232-RC | 190..562 | 34..406 | 1865 | 100 | Plus |
CG34232-RA | 702 | CG34232-RA | 117..489 | 34..406 | 1865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:12:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12165122..12165511 | 406..17 | 1950 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 16:12:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 696..737 | 301..342 | 111 | 73.8 | Plus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 8578..8619 | 301..342 | 111 | 73.8 | Plus |
BS20743.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:09 Download gff for
BS20743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RB | 198..581 | 23..406 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:22 Download gff for
BS20743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RB | 215..598 | 23..406 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:58:34 Download gff for
BS20743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RB | 235..618 | 23..406 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:58:34 Download gff for
BS20743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12165122..12165505 | 23..406 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:22 Download gff for
BS20743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8052627..8053010 | 23..406 | 100 | | Minus |
BS20743.pep Sequence
Translation from 16 to 405
> BS20743.pep
MFGPLQIIVFATILVAVAMAMQPLEDNERTHHLNHKRQLSQQHHHHHQKL
QEVRHSGHDSLKHGGSHVKEHQAHHSERKARQSHKEPGHKKSHHQKEHRQ
QQDNHTRKSRSHSKGSKQHHKRHTGSRRH*
BS20743.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34232-PB | 129 | CG34232-PB | 1..129 | 1..129 | 711 | 100 | Plus |
CG34232-PC | 127 | CG34232-PC | 5..127 | 7..129 | 678 | 100 | Plus |
CG34232-PA | 127 | CG34232-PA | 5..127 | 7..129 | 678 | 100 | Plus |