BS20749.complete Sequence
998 bp assembled on 2011-01-18
GenBank Submission: KX801106
> BS20749.complete
GAAGTTATCAGTCGACATGCATAACAACAGCTGTTTAGAACCCATGGACA
GGACCAAGACTACGAAACTTCCTCAGCTCAAGTCCAGCGTTACTCCCTAC
AGACCAAAGCCGAACCTAATCCGTAGTGATTCCCCGAAATTAGAGAACGA
TAAGCGTAATGGGCTGGACTTGGAGCTTCTGGATAATCCAGAGATACCGA
GCGTAAAGCGAGTACGATGGGCTCCGATGTATGGGGAAAGGAGCCCGAGT
AAGACCGGCTTTACCAGCGTTCCACTAAGCTCCAAAAAGGCGCAGTTTGA
TCATGATACGACAGATGAGTTAATACTGGCTAACGAGCTTCGATTAGCGG
TGCATCGTGGGGGAGGTTCCATAGATCCCGACAAGAACTACGAGCTGAGG
GCTCGACTGTCGCCCTTGCAATTGCCGTACAGTCGAGTGCAGCGAATTCT
GAAGGAGTGCGAGTTGAGCGAGAGGAATCATCACACCTATAGTATACCCA
TGGACTATGGGCGGCAATTGGTTGCCATGGTTTGCAAGATCAGGACGGAT
AATCTCCCCGAACTGAAACTTCGCTTGGCCTCCTTACTGCGGCAAAACAA
AGCGCGCTTCTTCAATCGACATTTATTCAACGAAACTGGCTTGATTGAGG
CCACATTGCCGAGCGTAACACCATTAAGCTTTGAGGAATTCAATCAAACG
TTGCGAATTGATGCTTTGTGGTGCAAAGCCACCGATAGTACCATTACCGA
TTTGGCCAAAGGATCTGTTTTGTTCAAATGTCGGCCTCTGGACCTGCAAG
AGGTCGCGTACAAACTCAGGCAGTGCAACTACAAGATTGTACATAAGGAG
GTTGGACACTGTCCAAACAAGCCGCTCGTCGAGTTAAATGATCGTCAAAT
GGCCCGCTATCAGGAGTTTCGTAAAAACCTTCTTCAAGACATAGATGTCG
TAAAGATCTATGACAATGTGCGTGTCCAGTAGAAGCTTTCTAGACCAT
BS20749.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:12:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31244-RA | 966 | CG31244-PA | 1..966 | 17..982 | 4830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:12:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31244-RA | 1138 | CG31244-RA | 86..1051 | 17..982 | 4830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:12:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19397517..19398482 | 982..17 | 4830 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:12:42 has no hits.
BS20749.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:12 Download gff for
BS20749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31244-RA | 86..1051 | 17..982 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:32 Download gff for
BS20749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31244-RA | 86..1051 | 17..982 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:58:44 Download gff for
BS20749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31244-RA | 86..1051 | 17..982 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:58:44 Download gff for
BS20749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19397517..19398482 | 17..982 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:32 Download gff for
BS20749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15223239..15224204 | 17..982 | 100 | | Minus |
BS20749.pep Sequence
Translation from 16 to 981
> BS20749.pep
MHNNSCLEPMDRTKTTKLPQLKSSVTPYRPKPNLIRSDSPKLENDKRNGL
DLELLDNPEIPSVKRVRWAPMYGERSPSKTGFTSVPLSSKKAQFDHDTTD
ELILANELRLAVHRGGGSIDPDKNYELRARLSPLQLPYSRVQRILKECEL
SERNHHTYSIPMDYGRQLVAMVCKIRTDNLPELKLRLASLLRQNKARFFN
RHLFNETGLIEATLPSVTPLSFEEFNQTLRIDALWCKATDSTITDLAKGS
VLFKCRPLDLQEVAYKLRQCNYKIVHKEVGHCPNKPLVELNDRQMARYQE
FRKNLLQDIDVVKIYDNVRVQ*
BS20749.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31244-PA | 321 | CG31244-PA | 1..321 | 1..321 | 1681 | 100 | Plus |
