BS20753.complete Sequence
1166 bp assembled on 2011-01-18
GenBank Submission: KX801756
> BS20753.complete
GAAGTTATCAGTCGACATGTCGTGCGCAAAGCCGCATATTTTGATTATTG
AACCGTTTTACGGGGGCAGTCACAAACAGCTGATCGGCGCACTGATCGAG
GGTCTCAACCATGGCGACAGCGAGATATTCAGCCTTCCCGCCAAGAAATG
GCACTGGCGAGCACGCACCTCTGCCCTCCACTTCGCCCAGCTGATTCCGC
GCGATCACGCATTCCGGGTGCTTTTCGCCAGCTCCGTGCTCAGCCTGGCC
GAGCTGATTGGTCTGCGTCCGGATCTGGCCGCTTGCCGGAAGATCGTCTA
CTTCCACGAGAACCAGCTGATCTATCCGGTGCGCGAGGTGAAGCAGCGCG
ATTGTCAATACGGTTTCAATGAGATACTCTCCTGTCTTGCCGCAGACATG
GTGCTCTTCAATTCCCAATTCAACTGCAACTCGTTTTTGGATAATGTTCA
GCCCTTTCTGAATATGCAGCCAGACTTTAAAATCAAGCATATTCGCGAGC
AAATCGAGAAGAAATGCCAAGTGCTGTACTTTCCCGTCAATTTCGAACGG
TTTCCCATTCGGAAGGAGTGCGTAAAGGGGGAGACTGCTGAGGATCTGGA
TGAGAAGTGCATCCATCTTATTTGGCCACATCGCTGGGAGCACGATAAGA
ATCCCAAACTACTGGTGGATACGCTCTGTCAGCTCCATGAGCGACAAGTG
GACTTCAAGGTGACTATTTGTGGCGAGAGTTACCAGGAGATACCGGAGGA
ATTCGAGCATATACAGGAGAAACTGGGCAGCAAGCTGGTGAACTTTGGCC
ATCTGGAGCGTGAAGAGTACTTGAAGACCCTGCTGACTGGGGACATTGTG
ATATCAACTGCCGACCATGAGTTTTTTGGAGTAGCAATGCTGGAGGCCGC
TTTCTGCGGCTGTTATCCCATTGCGCCCAACAAATTGGTCTACCCGGAAA
TCTACCCAAAGGAAAACCTCTACAACACCTCCAATGCGCTGACGAAGAAG
CTCTACAACTTTTGTAGAATGCCGAGGGTCTTTCGCAAGCAGCGCGATCA
ATTCTTTGAGAACTTTAATTTCGATCGTTTTTCGGCGAAAGAACTAGTGC
CAAAATATCTGGACATATTCAATAAACATATTGCAGACGAACAAAGTTAG
AAGCTTTCTAGACCAT
BS20753.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:12:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15914-RA | 1134 | CG15914-PA | 1..1134 | 17..1150 | 5670 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:12:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15914-RA | 1422 | CG15914-RA | 25..1161 | 16..1152 | 5685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:12:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15853941..15854709 | 384..1152 | 3845 | 100 | Plus |
| X | 23542271 | X | 15853605..15853888 | 101..384 | 1420 | 100 | Plus |
| X | 23542271 | X | 15853445..15853532 | 16..103 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:12:47 has no hits.
BS20753.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:13 Download gff for
BS20753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15914-RA | 26..1159 | 17..1150 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:34 Download gff for
BS20753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15914-RA | 26..1159 | 17..1150 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:58:46 Download gff for
BS20753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15914-RA | 26..1159 | 17..1150 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:58:46 Download gff for
BS20753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15853446..15853530 | 17..101 | 100 | -> | Plus |
| X | 15853606..15853888 | 102..384 | 100 | -> | Plus |
| X | 15853942..15854707 | 385..1150 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:34 Download gff for
BS20753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15747479..15747563 | 17..101 | 100 | -> | Plus |
| arm_X | 15747639..15747921 | 102..384 | 100 | -> | Plus |
| arm_X | 15747975..15748740 | 385..1150 | 100 | | Plus |
BS20753.pep Sequence
Translation from 16 to 1149
> BS20753.pep
MSCAKPHILIIEPFYGGSHKQLIGALIEGLNHGDSEIFSLPAKKWHWRAR
TSALHFAQLIPRDHAFRVLFASSVLSLAELIGLRPDLAACRKIVYFHENQ
LIYPVREVKQRDCQYGFNEILSCLAADMVLFNSQFNCNSFLDNVQPFLNM
QPDFKIKHIREQIEKKCQVLYFPVNFERFPIRKECVKGETAEDLDEKCIH
LIWPHRWEHDKNPKLLVDTLCQLHERQVDFKVTICGESYQEIPEEFEHIQ
EKLGSKLVNFGHLEREEYLKTLLTGDIVISTADHEFFGVAMLEAAFCGCY
PIAPNKLVYPEIYPKENLYNTSNALTKKLYNFCRMPRVFRKQRDQFFENF
NFDRFSAKELVPKYLDIFNKHIADEQS*
BS20753.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15914-PA | 377 | CG15914-PA | 1..377 | 1..377 | 2030 | 100 | Plus |
