BS20758.complete Sequence
314 bp assembled on 2011-01-18
GenBank Submission: KX803939
> BS20758.complete
GAAGTTATCAGTCGACATGGCTGATATGGAGATACAGAGCAACAAAATGT
CAATAACGGAGGAAACACAAGTGACGCGCAAGGAATGTGGAAAAAGGGGA
CGAAAACCAGGAAGAAAGACGTCTACTGAAAAATTGGACATGAAAGCCAA
ACTAGAACGCAGCAGACAAAGTGCCAGGGAATGCCGGGCGCGCAAGAAGC
TGCGGTATCAGTACCTGGAGGAACTGGTGGCGGATCGGGAGAAGGCTGTA
GTTGCTTTGCGTACGGAACTGGAGCGCGTCGTTAATTCAATGGAATAAAA
GCTTTCTAGACCAT
BS20758.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:12:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18619-RC | 282 | CG18619-PC | 1..282 | 17..298 | 1410 | 100 | Plus |
| CG18619-RD | 285 | CG18619-PD | 1..285 | 17..298 | 1345 | 98.9 | Plus |
| CG18619-RB | 354 | CG18619-PB | 1..278 | 17..298 | 1315 | 98.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:12:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18619-RC | 516 | CG18619-RC | 84..365 | 17..298 | 1410 | 100 | Plus |
| CG18619-RD | 634 | CG18619-RD | 84..368 | 17..298 | 1345 | 98.9 | Plus |
| CG18619-RB | 627 | CG18619-RB | 84..361 | 17..298 | 1315 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:12:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10264762..10264889 | 154..281 | 640 | 100 | Plus |
| 2L | 23513712 | 2L | 10264551..10264633 | 73..155 | 415 | 100 | Plus |
| 2L | 23513712 | 2L | 10264208..10264264 | 17..73 | 285 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:12:29 has no hits.
BS20758.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:10 Download gff for
BS20758.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18619-RC | 78..357 | 17..296 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:26 Download gff for
BS20758.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18619-RC | 84..363 | 17..296 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:58:38 Download gff for
BS20758.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18619-RC | 84..363 | 17..296 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:58:38 Download gff for
BS20758.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10264208..10264264 | 17..73 | 100 | -> | Plus |
| 2L | 10264552..10264633 | 74..155 | 100 | -> | Plus |
| 2L | 10264764..10264889 | 156..281 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:26 Download gff for
BS20758.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10264552..10264633 | 74..155 | 100 | -> | Plus |
| arm_2L | 10264764..10264889 | 156..281 | 100 | -> | Plus |
| arm_2L | 10264208..10264264 | 17..73 | 100 | -> | Plus |
BS20758.pep Sequence
Translation from 16 to 297
> BS20758.pep
MADMEIQSNKMSITEETQVTRKECGKRGRKPGRKTSTEKLDMKAKLERSR
QSARECRARKKLRYQYLEELVADREKAVVALRTELERVVNSME*
BS20758.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18619-PC | 93 | CG18619-PC | 1..93 | 1..93 | 459 | 100 | Plus |
| CG18619-PD | 94 | CG18619-PD | 1..94 | 1..93 | 447 | 98.9 | Plus |
| CG18619-PB | 117 | CG18619-PB | 1..89 | 1..89 | 435 | 97.8 | Plus |
| CG18619-PA | 118 | CG18619-PA | 1..90 | 1..89 | 423 | 96.7 | Plus |
