BS20760.complete Sequence
533 bp assembled on 2011-01-18
GenBank Submission: KX800970
> BS20760.complete
GAAGTTATCAGTCGACATGCCAGATGCCGAGCAACTACCGGACGGCTGGG
AGAAGCGCACTAGCCGCTCCACAGGAATGAGCTATTATCTCAATATGTAC
ACAAAGGAGTCGCAGTGGGATCAGCCCACAGAGCCGGCGAAGAAGGCGGG
CGGAGGATCCGCCGGCGGCGGAGATGCACCGGACGAGGTGCATTGCCTGC
ATCTGCTGGTTAAGCACAAGGGCAGTCGGCGTCCCAGCTCGTGGCGCGAG
GCGAACATCACGCGCACCAAGGAGGAGGCCCAGCTGCTCCTCGAGGTCTA
TCGCAACAAAATCGTCCAGCAGGAGGCCACATTCGACGAGCTGGCCCGCT
CCTACTCCGACTGCAGCTCCGCCAAGAGGGGCGGCGACCTGGGAAAGTTC
GGCAGAGGTCAGATGCAGGCGGCTTTCGAGGACGCTGCCTTCAAATTGAA
CGTCAACCAGCTGTCGGGCATCGTCGACAGCGACTCCGGCCTGCACATCA
TCCTGCGCAAGGCATAGAAGCTTTCTAGACCAT
BS20760.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:12:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dod-RA | 501 | CG17051-PA | 1..501 | 17..517 | 2505 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:12:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dod-RA | 1021 | CG17051-RA | 93..595 | 16..518 | 2515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:12:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21345617..21345954 | 72..409 | 1690 | 100 | Plus |
| X | 23542271 | X | 21346320..21346432 | 406..518 | 565 | 100 | Plus |
| X | 23542271 | X | 21345450..21345509 | 16..75 | 300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:12:37 has no hits.
BS20760.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:12 Download gff for
BS20760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dod-RA | 104..604 | 17..517 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:31 Download gff for
BS20760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dod-RA | 94..594 | 17..517 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:58:41 Download gff for
BS20760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dod-RA | 94..594 | 17..517 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:58:41 Download gff for
BS20760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21345620..21345952 | 75..407 | 100 | -> | Plus |
| X | 21346322..21346431 | 408..517 | 100 | | Plus |
| X | 21345451..21345508 | 17..74 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:31 Download gff for
BS20760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21217349..21217458 | 408..517 | 100 | | Plus |
| arm_X | 21216647..21216979 | 75..407 | 100 | -> | Plus |
| arm_X | 21216478..21216535 | 17..74 | 100 | -> | Plus |
BS20760.pep Sequence
Translation from 16 to 516
> BS20760.pep
MPDAEQLPDGWEKRTSRSTGMSYYLNMYTKESQWDQPTEPAKKAGGGSAG
GGDAPDEVHCLHLLVKHKGSRRPSSWREANITRTKEEAQLLLEVYRNKIV
QQEATFDELARSYSDCSSAKRGGDLGKFGRGQMQAAFEDAAFKLNVNQLS
GIVDSDSGLHIILRKA*
BS20760.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dod-PA | 166 | CG17051-PA | 1..166 | 1..166 | 871 | 100 | Plus |
| CG32845-PA | 386 | CG32845-PA | 72..235 | 6..164 | 244 | 37.8 | Plus |
