BS20761.complete Sequence
884 bp assembled on 2011-01-18
GenBank Submission: KX805461
> BS20761.complete
GAAGTTATCAGTCGACATGCATGTTGAAAAGAAATCAGAGCTTCGTAGCC
TACTAAAATCCGGGGACAAGCGTTGCAAACTCGTTGAGCCCAGGAACACC
AAAAGCTGCGTCTGGAGGTTTTTCAATCTCGTCCAGTGCGACGACCACAT
AGAGCCGTACGCCTGCTGCAAAACCTGTGGCGATCTGTTATCCTACAGCG
GCAAAACTGGAACCGGATCCCTGCTACGGCACCGATGTCTCCACTCCAGC
AGCAGTAACGACAAAACCGTGCGGATTACCAAGGCCAAGACGCTGAGGGA
GCCGCTGCGTGTGGCCAAGCCGAAGATCGAGTCGAACGTCGCCAATTATC
TGGGCGAGGCGGGCGCCCTGCCGCAAAAGTGGGAGGAGTACGAGCAGAAC
GATGAGATTAGCGAGGACATTAAGGACATCATATACAGCGAGGATCCACT
GTGCTATAGTCCTATACACGTGATGGATGATGAGGGCCTGGATCAGCCTG
AGAAGCAAGTGACCGTGCTAACCCATTCGACTTCACCAGCCGGTGGAAGT
AGCAGGCCCATCGGTGTTGGTTCGGGCGTACAGGCTACTGTGGTGGCCTC
CACGTCCTCCAGCAGCAGCTCGGCCAAGCAGCTGAAGAACAACCTGGAGA
CGTCCATCGAACGGCTGACCGCTGTCAGCGAACAGCTCAGCTACATCATA
CAACAGAATCACGAGGAGCTCACCAAGGACGACGACTACTATTTTGCACT
TAGCTTGGTGCCCGCAATGCGCCACCTTTCGCTCAGTCGGAAGATGTACG
TGCGGTCCAAGATCCAGGATATACTGTTCAAGGAAAGTGAGGACTCAACG
CTTGCCAAGGATGAGTAGAAGCTTTCTAGACCAT
BS20761.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:13:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BEAF-32-RA | 852 | CG10159-PA | 1..852 | 17..868 | 4260 | 100 | Plus |
| BEAF-32-RC | 849 | CG10159-PC | 241..849 | 260..868 | 3045 | 100 | Plus |
| BEAF-32-RB | 849 | CG10159-PB | 241..849 | 260..868 | 3045 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BEAF-32-RA | 1192 | CG10159-RA | 118..969 | 17..868 | 4260 | 100 | Plus |
| BEAF-32-RC | 1558 | CG10159-RC | 727..1335 | 260..868 | 3045 | 100 | Plus |
| BEAF-32-RB | 1173 | CG10159-RB | 342..950 | 260..868 | 3045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14771799..14772407 | 260..868 | 3045 | 100 | Plus |
| 2R | 25286936 | 2R | 14770586..14770829 | 17..260 | 1220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:13:05 has no hits.
BS20761.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:16 Download gff for
BS20761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BEAF-32-RA | 117..968 | 17..868 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:42 Download gff for
BS20761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BEAF-32-RA | 118..969 | 17..868 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:58:54 Download gff for
BS20761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BEAF-32-RA | 118..969 | 17..868 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:58:54 Download gff for
BS20761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14770586..14770829 | 17..260 | 100 | -> | Plus |
| 2R | 14771800..14772407 | 261..868 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:42 Download gff for
BS20761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10658091..10658334 | 17..260 | 100 | -> | Plus |
| arm_2R | 10659305..10659912 | 261..868 | 100 | | Plus |
BS20761.pep Sequence
Translation from 16 to 867
> BS20761.pep
MHVEKKSELRSLLKSGDKRCKLVEPRNTKSCVWRFFNLVQCDDHIEPYAC
CKTCGDLLSYSGKTGTGSLLRHRCLHSSSSNDKTVRITKAKTLREPLRVA
KPKIESNVANYLGEAGALPQKWEEYEQNDEISEDIKDIIYSEDPLCYSPI
HVMDDEGLDQPEKQVTVLTHSTSPAGGSSRPIGVGSGVQATVVASTSSSS
SSAKQLKNNLETSIERLTAVSEQLSYIIQQNHEELTKDDDYYFALSLVPA
MRHLSLSRKMYVRSKIQDILFKESEDSTLAKDE*
BS20761.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BEAF-32-PA | 283 | CG10159-PA | 1..283 | 1..283 | 1460 | 100 | Plus |
| BEAF-32-PC | 282 | CG10159-PC | 2..282 | 25..283 | 1034 | 76.2 | Plus |
| BEAF-32-PB | 282 | CG10159-PB | 2..282 | 25..283 | 1034 | 76.2 | Plus |
