BS20762.complete Sequence
476 bp assembled on 2011-01-18
GenBank Submission: KX804840
> BS20762.complete
GAAGTTATCAGTCGACATGCAGCAAGTCGATGAAAATCTGAAGAAGAAGC
GTACCTTCAAGAAGTTCACCTACCGCGGTGTTGACTTGGACCAGCTTCTG
GACATGCCCAACAACCAGCTGGTGGAGCTGATGCACAGCCGTGCCCGCAG
GCGTTTCTCCCGCGGACTGAAGCGCAAGCCAATGGCTCTGATCAAGAAGC
TGCGCAAGGCCAAGAAGGAGGCACCGCCAAATGAGAAGCCCGAGATTGTC
AAGACCCACCTGAGGAACATGATCATCGTACCCGAGATGACCGGCTCCAT
CATTGGCGTCTACAACGGCAAGGACTTCGGACAGGTGGAGGTCAAGCCCG
AGATGATCGGTCACTACCTGGGCGAGTTCGCCCTGACCTACAAGCCCGTC
AAGCACGGTCGTCCTGGTATCGGTGCCACCCACAGCTCCCGTTTCATTCC
TCTGAAGTGAAAGCTTTCTAGACCAT
BS20762.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:13:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS15-RB | 444 | CG8332-PB | 1..444 | 17..460 | 2205 | 99.8 | Plus |
| RpS15-RA | 447 | CG8332-PA | 10..447 | 23..460 | 2175 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS15-RB | 726 | CG8332-RB | 220..663 | 17..460 | 2205 | 99.8 | Plus |
| RpS15-RA | 627 | CG8332-RA | 43..480 | 23..460 | 2175 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16570624..16570848 | 336..112 | 1125 | 100 | Minus |
| 2R | 25286936 | 2R | 16570259..16570388 | 460..331 | 650 | 100 | Minus |
| 2R | 25286936 | 2R | 16570917..16571011 | 111..17 | 460 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:13:10 has no hits.
BS20762.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:16 Download gff for
BS20762.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS15-RB | 195..637 | 17..459 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:44 Download gff for
BS20762.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS15-RB | 220..662 | 17..459 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:58:57 Download gff for
BS20762.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS15-RB | 220..662 | 17..459 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:58:57 Download gff for
BS20762.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16570260..16570384 | 335..459 | 100 | <- | Minus |
| 2R | 16570626..16570848 | 112..334 | 100 | <- | Minus |
| 2R | 16570917..16571011 | 17..111 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:44 Download gff for
BS20762.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12458422..12458516 | 17..111 | 98 | | Minus |
| arm_2R | 12457765..12457889 | 335..459 | 100 | <- | Minus |
| arm_2R | 12458131..12458353 | 112..334 | 100 | <- | Minus |
BS20762.pep Sequence
Translation from 16 to 459
> BS20762.pep
MQQVDENLKKKRTFKKFTYRGVDLDQLLDMPNNQLVELMHSRARRRFSRG
LKRKPMALIKKLRKAKKEAPPNEKPEIVKTHLRNMIIVPEMTGSIIGVYN
GKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSSRFIPLK*
BS20762.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS15-PB | 147 | CG8332-PB | 1..147 | 1..147 | 764 | 100 | Plus |
| RpS15-PA | 148 | CG8332-PA | 4..148 | 3..147 | 754 | 100 | Plus |
