BS20765.complete Sequence
776 bp assembled on 2011-01-18
GenBank Submission: KX806472
> BS20765.complete
GAAGTTATCAGTCGACATGACCAAAGTTGAGCTATACAAGTCGCGCGTCT
TTGTGACAATCATACACCTGTGTGCACTCGGCCAATTCGCCTATGGACTC
TACTACAGCTCCTTCGAGATCCAAAGGAGCTACAAACTGAAGACGAGCCT
CAATCGCCGCCTGGTTCCCGAATCGCTGCCCCAGAAAATCAAATTGCTGT
CCTACTGGTCGCTGATAATTCAGGCACTGTACTATATTGTATCGCTGGTC
AACGATTTCGTGGGCACTAATGAGCTGACACCCAAGAAACCTCCGGCGGT
TCGCAGGTTCAAGGACTGGCTGATGGCTACATTGGCCTTTCCAGTGGCTA
TCAATGTGGGCGTGACCTTCTGGACACTGTACGCTATCGACAGGGAGCTA
GTCTTCCCCAAGGTTCTGGACCCCGTGTTCCCCAGCTGGCTCAACCACGT
CCTGCACACCAACATAGTGGTTTTCATCATCCTGGAGCTGTTCATCTCGT
ACAGGTCGTACCCAAAACGAAGCCAAGGACTCGCAGGACTGGCCATTTTC
ATGGGCGCCTACCTGGTTTGGATTCACGTGGTGAAGCACTACTCGGGTGT
GTGGGTGTATCCAGTGCTCGAGGTTCTCCAGCTTCCGCAACGCATCCTGT
TTTTTGCGGCCGTCGTTGGATTCACGCTGTCACTTTACCTGCTGGGCGAG
TTCCTCAACAATACCGTCTGGGCCAAGGAAGTGAAGTTGGCCAAGCGCAA
ATCCAACTAGAAGCTTTCTAGACCAT
BS20765.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:13:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3625-RE | 744 | CG3625-PE | 1..744 | 17..760 | 3720 | 100 | Plus |
| CG3625-RC | 744 | CG3625-PC | 1..744 | 17..760 | 3720 | 100 | Plus |
| CG3625-RB | 747 | CG3625-PB | 201..747 | 214..760 | 2735 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3625-RE | 1401 | CG3625-RE | 157..900 | 17..760 | 3720 | 100 | Plus |
| CG3625-RC | 1455 | CG3625-RC | 211..954 | 17..760 | 3720 | 100 | Plus |
| CG3625-RB | 1341 | CG3625-RB | 294..840 | 214..760 | 2735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 283886..284213 | 760..433 | 1640 | 100 | Minus |
| 2L | 23513712 | 2L | 284748..284969 | 435..214 | 1110 | 100 | Minus |
| 2L | 23513712 | 2L | 290809..291010 | 218..17 | 995 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:13:19 has no hits.
BS20765.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:17 Download gff for
BS20765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3625-RC | 1..744 | 17..760 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:49 Download gff for
BS20765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3625-RC | 211..954 | 17..760 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:00 Download gff for
BS20765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3625-RC | 211..954 | 17..760 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:00 Download gff for
BS20765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 283886..284210 | 436..760 | 100 | <- | Minus |
| 2L | 284748..284968 | 215..435 | 100 | <- | Minus |
| 2L | 290813..291010 | 17..214 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:49 Download gff for
BS20765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 283886..284210 | 436..760 | 100 | <- | Minus |
| arm_2L | 284748..284968 | 215..435 | 100 | <- | Minus |
| arm_2L | 290813..291010 | 17..214 | 100 | | Minus |
BS20765.pep Sequence
Translation from 16 to 759
> BS20765.pep
MTKVELYKSRVFVTIIHLCALGQFAYGLYYSSFEIQRSYKLKTSLNRRLV
PESLPQKIKLLSYWSLIIQALYYIVSLVNDFVGTNELTPKKPPAVRRFKD
WLMATLAFPVAINVGVTFWTLYAIDRELVFPKVLDPVFPSWLNHVLHTNI
VVFIILELFISYRSYPKRSQGLAGLAIFMGAYLVWIHVVKHYSGVWVYPV
LEVLQLPQRILFFAAVVGFTLSLYLLGEFLNNTVWAKEVKLAKRKSN*
BS20765.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3625-PE | 247 | CG3625-PE | 1..247 | 1..247 | 1278 | 100 | Plus |
| CG3625-PC | 247 | CG3625-PC | 1..247 | 1..247 | 1278 | 100 | Plus |
| CG3625-PB | 248 | CG3625-PB | 19..248 | 14..247 | 998 | 84.2 | Plus |
| CG3625-PA | 245 | CG3625-PA | 25..245 | 15..247 | 967 | 82.1 | Plus |
| CG11601-PC | 275 | CG11601-PC | 43..270 | 15..245 | 546 | 42.9 | Plus |
