BS20770.complete Sequence
356 bp assembled on 2011-01-18
GenBank Submission: KX806309
> BS20770.complete
GAAGTTATCAGTCGACATGGTTTACATATGCACTCTTGTGGTGTTGATCT
TTCCCGTCTTGTTGTTGGGTGCACCATGGGAAGGGTCGCATCCTAAGTCT
CAGGTGGAATACATCAGCAACGACAAGAGAGTTGATTCTGGCTTCGCCAA
CCCCAATATCGTGCCCATCACCCAGCCGTCGGTCGTAACGCAAACAGCTC
CTCCTCCGCCGCCAAATTCCAAAAACTTTGCATATAGTCCGATGACGCAG
AGCTGGACCCTCATTGCGCCAGGCGATCCGCTGCCCAATAATGACACCCT
CGTCTGGAACCAGAGCAATGACAAATGGCTCACTCGCTAAAAGCTTTCTA
GACCAT
BS20770.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:12:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13877-RC | 324 | CG13877-PC | 1..324 | 17..340 | 1620 | 100 | Plus |
CG13877-RB | 327 | CG13877-PB | 1..327 | 17..340 | 1555 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:12:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13877-RC | 416 | CG13877-RC | 20..343 | 17..340 | 1620 | 100 | Plus |
CG13877-RB | 507 | CG13877-RB | 113..439 | 17..340 | 1555 | 99.1 | Plus |
pyx-RB | 2502 | CG17142-RB | 1944..2251 | 340..33 | 1540 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:12:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 218283..218590 | 33..340 | 1540 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:12:51 has no hits.
BS20770.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:14 Download gff for
BS20770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13877-RC | 114..435 | 17..338 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:36 Download gff for
BS20770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13877-RC | 20..341 | 17..338 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:58:48 Download gff for
BS20770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13877-RC | 20..341 | 17..338 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:58:48 Download gff for
BS20770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 218180..218195 | 17..32 | 100 | -> | Plus |
3L | 218283..218588 | 33..338 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:36 Download gff for
BS20770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 218180..218195 | 17..32 | 100 | -> | Plus |
arm_3L | 218283..218588 | 33..338 | 100 | | Plus |
BS20770.pep Sequence
Translation from 16 to 339
> BS20770.pep
MVYICTLVVLIFPVLLLGAPWEGSHPKSQVEYISNDKRVDSGFANPNIVP
ITQPSVVTQTAPPPPPNSKNFAYSPMTQSWTLIAPGDPLPNNDTLVWNQS
NDKWLTR*
BS20770.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13877-PC | 107 | CG13877-PC | 1..107 | 1..107 | 584 | 100 | Plus |
CG13877-PB | 108 | CG13877-PB | 1..108 | 1..107 | 572 | 99.1 | Plus |