BS20771.complete Sequence
515 bp assembled on 2011-01-18
GenBank Submission: KX803069
> BS20771.complete
GAAGTTATCAGTCGACATGGAGTCAATTAGCAGCATGATTTATTTAGTGG
CCATGATGTCATTGATCATCGGTGGCAGCCAAGCGATTCCTTATCGACCC
TCGGCGTATCTGTACAATCAGCAGTACTGTATGGATACATTGACGGGTCG
GCAGCTTTATATCGGTGAAGTCTTCACGCGAGAGGATCAGTGCGTCCGCA
TCCAATGCCTGGAAACGCTGCAACTCTGGGAGGATAGCTGCCAGGTGCCG
AAACTGACGCAGGGCAATTGCACGCCAGTTCCATCGACGAACCCGCATGC
CGAATATCCCCGATGCTGCCCACTGTATGAGTGCAAGAGCTACGAGTCGA
ATTCGGGGGGAACTCTGGAGCAGACCAACATATATGACCACTATGGTACT
CTGCGATCATCCCATCTCACTGAGATGATAGTGATCGACGGGCGGACACC
CCCTCGTGGCGAGATTCACACGGCGTCGGCGAGGAAGTATCAGGTGTGAA
AGCTTTCTAGACCAT
BS20771.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:12:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vago-RD | 483 | CG2081-PD | 1..483 | 17..499 | 2415 | 100 | Plus |
| Vago-RB | 483 | CG2081-PB | 1..483 | 17..499 | 2415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:12:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vago-RD | 796 | CG2081-RD | 82..564 | 17..499 | 2415 | 100 | Plus |
| Vago-RB | 684 | CG2081-RB | 82..564 | 17..499 | 2415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:12:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11089724..11089987 | 236..499 | 1320 | 100 | Plus |
| X | 23542271 | X | 11089521..11089659 | 99..237 | 695 | 100 | Plus |
| X | 23542271 | X | 11089371..11089452 | 17..98 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:12:55 has no hits.
BS20771.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:14 Download gff for
BS20771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vago-RB | 82..563 | 17..498 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:38 Download gff for
BS20771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vago-RB | 82..563 | 17..498 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:58:49 Download gff for
BS20771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vago-RB | 82..563 | 17..498 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:58:49 Download gff for
BS20771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11089371..11089452 | 17..98 | 100 | -> | Plus |
| X | 11089521..11089659 | 99..237 | 100 | -> | Plus |
| X | 11089726..11089986 | 238..498 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:38 Download gff for
BS20771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10983404..10983485 | 17..98 | 100 | -> | Plus |
| arm_X | 10983554..10983692 | 99..237 | 100 | -> | Plus |
| arm_X | 10983759..10984019 | 238..498 | 100 | | Plus |
BS20771.pep Sequence
Translation from 16 to 498
> BS20771.pep
MESISSMIYLVAMMSLIIGGSQAIPYRPSAYLYNQQYCMDTLTGRQLYIG
EVFTREDQCVRIQCLETLQLWEDSCQVPKLTQGNCTPVPSTNPHAEYPRC
CPLYECKSYESNSGGTLEQTNIYDHYGTLRSSHLTEMIVIDGRTPPRGEI
HTASARKYQV*
BS20771.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vago-PD | 160 | CG2081-PD | 1..160 | 1..160 | 864 | 100 | Plus |
| Vago-PB | 160 | CG2081-PB | 1..160 | 1..160 | 864 | 100 | Plus |
