BS20773.complete Sequence
491 bp assembled on 2011-01-18
GenBank Submission: KX802383
> BS20773.complete
GAAGTTATCAGTCGACATGGCCAGCCCCGTGGAACTGCTAAGCCTCTCCA
ATCCCGTCTTCAAGAGTTTCACCTTTTGGGTCGGAGTTTTGGTGATCAAA
ATGCTGCTGATGAGCCTTCTGACAGCCATCCAGCGTTTCAAGACGAAGAC
CTTCGCCAACCCCGAGGACCTGATGTCCCCCAAGCTGAAGGTCAAGTTCG
ACGATCCGAACGTGGAGCGTGTGCGCCGTGCCCACCGCAACGACCTGGAG
AACATCCTGCCCTTCTTCGCCATCGGTCTGCTCTACGTCCTGACTGATCC
GGCCGCCTTTCTGGCCATCAACCTGTTCCGCGCCGTGGGCATCGCCCGCA
TCGTCCACACACTGGTCTACGCCGTGGTCGTGGTGCCCCAGCCTTCCCGT
GCCCTCGCCTTCTTCGTGGCCTTGGGCGCCACCGTCTACATGGCCCTGCA
GGTCATCGCCTCGGCCGCCTTCTGAAAGCTTTCTAGACCAT
BS20773.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:13:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mgstl-RA | 459 | CG1742-PA | 1..459 | 17..475 | 2295 | 100 | Plus |
| Mgstl-RC | 456 | CG1742-PC | 130..456 | 149..475 | 1635 | 100 | Plus |
| Mgstl-RB | 456 | CG1742-PB | 130..456 | 149..475 | 1635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mgstl-RA | 660 | CG1742-RA | 101..559 | 17..475 | 2295 | 100 | Plus |
| Mgstl-RC | 951 | CG1742-RC | 524..850 | 149..475 | 1635 | 100 | Plus |
| Mgstl-RB | 591 | CG1742-RB | 164..490 | 149..475 | 1635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22226213..22226671 | 17..475 | 2055 | 96.5 | Plus |
| X | 23542271 | X | 21043678..21044006 | 147..475 | 1645 | 100 | Plus |
| X | 23542271 | X | 21043170..21043301 | 17..148 | 660 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:13:36 has no hits.
BS20773.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:20 Download gff for
BS20773.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mgstl-RA | 99..556 | 17..474 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:58 Download gff for
BS20773.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mgstl-RA | 101..558 | 17..474 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:08 Download gff for
BS20773.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mgstl-RA | 101..558 | 17..474 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:08 Download gff for
BS20773.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22226213..22226670 | 17..474 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:58 Download gff for
BS20773.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22226213..22226670 | 17..474 | 96 | | Plus |
BS20773.pep Sequence
Translation from 16 to 474
> BS20773.pep
MASPVELLSLSNPVFKSFTFWVGVLVIKMLLMSLLTAIQRFKTKTFANPE
DLMSPKLKVKFDDPNVERVRRAHRNDLENILPFFAIGLLYVLTDPAAFLA
INLFRAVGIARIVHTLVYAVVVVPQPSRALAFFVALGATVYMALQVIASA
AF*
BS20773.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mgstl-PA | 152 | CG1742-PA | 1..152 | 1..152 | 749 | 100 | Plus |
| Mgstl-PC | 151 | CG1742-PC | 5..151 | 6..152 | 614 | 83 | Plus |
| Mgstl-PB | 151 | CG1742-PB | 5..151 | 6..152 | 614 | 83 | Plus |
| CG33178-PC | 165 | CG33178-PC | 12..157 | 1..146 | 446 | 61 | Plus |
| CG33178-PA | 165 | CG33178-PA | 12..157 | 1..146 | 446 | 61 | Plus |
