BS20775.complete Sequence
656 bp assembled on 2011-01-18
GenBank Submission: KX805981
> BS20775.complete
GAAGTTATCAGTCGACATGCTAAAGGGTAGCACACTGAAAGCCCTGGACG
TCAGAATCCTATGGCCCCTTATTGAAACAAGTGGAGGACACCAGCGCAGC
TTCTCCAGCAGCACCCACCGGTCCTACATAACATTCAATGATTTCCGCAA
AAAACACCGCTGGTACACAAAAAAGGAGCTTGTGGGCTACTCCATGCAGG
ACATGTACAGCGTGGTTTCCGACGTCAGCAATTACCACAAGTTCGTGCCG
TATGTGAAGCGCTCCGATGTGCACAGCCGGGGAAGTGAGGGCTTCAAGGC
GGACCTCATTGTTGGCTTTCCGCCGCTTAACGAGGCCTACACCTCGCAGG
TGACCCTGGTGCCGCCCAGCTTGGTTAAGTCAGAGTGCCACGATGGACGT
CTGTTCAACTACCTCCTGAATGAGTGGTCTTTTAAGCCGGGCCTCAAGGA
CATACCTAACTCCTGCGTGCTGGACTTCAAGGTATCGTTCGAGTTCAAGT
CCCTCCTGCACAGCAACGTCGCCAACATATTTTTTGACCTTATCTGCGAT
CAAATGGAAAACGCTTTTATCCAGGAGGTCCGTCGACGGAGTGGTCCGCC
CTCAATCCGCTCCCACGTGCTTACTTCGGATCGGTCCTGAAAGCTTTCTA
GACCAT
BS20775.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:13:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9410-RA | 624 | CG9410-PA | 1..624 | 17..640 | 3120 | 100 | Plus |
CG9410-RB | 729 | CG9410-PB | 169..729 | 80..640 | 2805 | 100 | Plus |
CG9410-RE | 123 | CG9410-PE | 1..123 | 17..131 | 460 | 93.5 | Plus |
CG9410-RB | 729 | CG9410-PB | 1..65 | 17..81 | 325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9410-RA | 891 | CG9410-RA | 137..760 | 17..640 | 3120 | 100 | Plus |
CG9410-RE | 833 | CG9410-RE | 71..702 | 17..640 | 3005 | 98.7 | Plus |
CG9410-RB | 930 | CG9410-RB | 239..799 | 80..640 | 2805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 6669491..6669945 | 186..640 | 2275 | 100 | Plus |
2R | 25286936 | 2R | 6669328..6669434 | 80..186 | 535 | 100 | Plus |
2R | 25286936 | 2R | 6669160..6669224 | 17..81 | 325 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:13:40 has no hits.
BS20775.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:20 Download gff for
BS20775.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9410-RD | 583..647 | 17..81 | 100 | -> | Plus |
CG9410-RD | 753..1310 | 82..639 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:59 Download gff for
BS20775.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9410-RA | 137..759 | 17..639 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:10 Download gff for
BS20775.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9410-RA | 137..759 | 17..639 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:10 Download gff for
BS20775.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 6669160..6669224 | 17..81 | 100 | -> | Plus |
2R | 6669330..6669434 | 82..186 | 100 | -> | Plus |
2R | 6669492..6669944 | 187..639 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:59 Download gff for
BS20775.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 2556665..2556729 | 17..81 | 100 | -> | Plus |
arm_2R | 2556835..2556939 | 82..186 | 100 | -> | Plus |
arm_2R | 2556997..2557449 | 187..639 | 100 | | Plus |
BS20775.pep Sequence
Translation from 16 to 639
> BS20775.pep
MLKGSTLKALDVRILWPLIETSGGHQRSFSSSTHRSYITFNDFRKKHRWY
TKKELVGYSMQDMYSVVSDVSNYHKFVPYVKRSDVHSRGSEGFKADLIVG
FPPLNEAYTSQVTLVPPSLVKSECHDGRLFNYLLNEWSFKPGLKDIPNSC
VLDFKVSFEFKSLLHSNVANIFFDLICDQMENAFIQEVRRRSGPPSIRSH
VLTSDRS*
BS20775.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9410-PA | 207 | CG9410-PA | 1..207 | 1..207 | 1093 | 100 | Plus |
CG9410-PB | 242 | CG9410-PB | 1..242 | 1..207 | 1047 | 85.5 | Plus |