BS20776.complete Sequence
335 bp assembled on 2011-01-18
GenBank Submission: KX804368
> BS20776.complete
GAAGTTATCAGTCGACATGACGAATTATGAGAACATTATAAATTTGCCAT
TAAACTTTAATGCAAATAATCACGCCGCTGGTAATAATGAGAACAATGCC
AAAATTGCCATCGTTGGCGAGCAGCTGCTGAATAAGATGTCGCAGCGGGA
TTTCTCCGAAAGCGGCGCTCCCTACCGCCGAAGAACTTCTTCGTTGGCCA
TTTGGAGGGCATGTTCCTGCTCTCTGTGCGTGTTATTTGACTTTGACCAT
TGGCAGCAGAAACGCCATATCATGTCTGCGAGATCTACTCGGCTAGCACC
GCCAACGCTCGGAAGATGAAAGCTTTCTAGACCAT
BS20776.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:13:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43163-RC | 7572 | CG43163-PC | 1..145 | 17..161 | 725 | 100 | Plus |
CG43163-RD | 7572 | CG43163-PD | 1..145 | 17..161 | 725 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43163-RC | 7878 | CG43163-RC | 107..251 | 17..161 | 725 | 100 | Plus |
CG43163-RD | 7970 | CG43163-RD | 199..343 | 17..161 | 725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8491304..8491463 | 320..161 | 800 | 100 | Minus |
3L | 28110227 | 3L | 8494119..8494262 | 160..17 | 720 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:13:45 has no hits.
BS20776.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:21 Download gff for
BS20776.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6902-RA | 50..351 | 17..318 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:02 Download gff for
BS20776.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43163-RD | 199..343 | 17..161 | 100 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:12 Download gff for
BS20776.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43163-RD | 199..343 | 17..161 | 100 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:12 Download gff for
BS20776.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8491306..8491463 | 161..318 | 100 | <- | Minus |
3L | 8494119..8494262 | 17..160 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:02 Download gff for
BS20776.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8484406..8484563 | 161..318 | 100 | <- | Minus |
arm_3L | 8487219..8487362 | 17..160 | 100 | | Minus |
BS20776.pep Sequence
Translation from 16 to 318
> BS20776.pep
MTNYENIINLPLNFNANNHAAGNNENNAKIAIVGEQLLNKMSQRDFSESG
APYRRRTSSLAIWRACSCSLCVLFDFDHWQQKRHIMSARSTRLAPPTLGR
*
BS20776.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43163-PC | 2523 | CG43163-PC | 1..49 | 1..49 | 249 | 98 | Plus |
CG43163-PD | 2523 | CG43163-PD | 1..49 | 1..49 | 249 | 98 | Plus |