BS20806.complete Sequence
4187 bp assembled on 2011-02-17
GenBank Submission: KX805054
> BS20806.complete
GAAGTTATCAGTCGACATGGGCAAATTCCGATCGAAGCTAAAGCGCAATG
GCAAGGGAAAGACATGGAGCAGAGGCGAATCGGCCACCTCCAATCCCACC
CAGATGAAGCACCGCATGAAGGCCAAATCGCGATTCTTTCAGCCCAATTT
AAGTTTGGCTGCAGCCACGACCACCGGCCTCACCATGGAGGCGGTCCACA
AGCATGAGCAGAGTCAGGCCTTTAATGCGGAAACCACAACGGTTAACGAT
GTGGCCGGCAGTTTGAGAAGTTTCAAACTGGATGACGATGATGACGGAAT
GTCCGGTTCCGGCACCGCTCCCACCGGCACCGCCCCCACCGGCACCATCA
AAACCTTCCAGACCTTCGCCTCCAACTACAGCGGTTGCAGCAACACATGC
TTCCAGAAACTGGTCACCAGCTTCCGGTCCTCGTCCGCTCTTCACAAGGA
GATGCTGGCCATTCTGAGCGCCCTCACCGAAATAATCCGCGAGAACGGCG
GTGGCGAGTCGTCTACAGAGTATTTCCTGCTGCTCATGGAGCAGATCGAG
GCCGCTACCGAGGAACGGGACATTGTGGCCGGCGTAACACTGCTTGCCAT
GGGCATTAATTCGGTGCCGGCTCCGGTTCTCAAAAAGCGATTCGCCCAGA
CCGCTGACACCATGCAGAGACTGCTCCAGCGCTTTATGGAGTCCACTAAC
CAGTCGGTCATCCGACATGTAATCGGCTGCCTTTCTGTCATTCTGCGCGC
CCAGGATTACGCGGCATGGTCATACAGCTCGACGTTCCAATACTTTGATG
CCATTCTGGCGTTCAGCATTCACTCACAGCCGAAGATCCGCAAGGCAGCC
CAGCATGCAATTGCCTTAATTATTCACGGCAGCTGTTTCATGCTGCCGGC
TATCAAATCAGATGACAATGAAATGGATGAAGCGGTTGAGCAGCCAAAGG
TTAAGCATCATCCGGCTAGCAGTCGCGTGGCCAAGTTCTGTTTGGCTCAG
TTCAAGCCGGAGGTACTGGCCAATGCACAGACGACAGTGCTGCACACTTT
GGAGCTTCTCAAGGACACGTTATACGGTTTCAAGACGGAGGACATACGCA
GTGTCTGCGAGCATCTGCTTTCCATTATGACGGCGGCCAATGTGCTGGTT
AGGACGAACTGTTTCCAGACACTGTACTCCCTTTTCCTCAAAAAAAGCCC
CAATTTAAATGCCTCACTCTGCGCCAAACTGCTGGCAGCGATACACGAGT
ACCGACCAGACAAAAGCGACATCCGGCAGACGATCGCCTGGGTGACGGTC
TTAAAGGAGGGCCACCTCCATTTGGCGACCATGCAGCTGGATCTTTGTAT
GCAGGCCTTGCCGCGTCTGATCGATGTCTGCACCACGGATCTTTGGCTCT
CGGACCAAAAGGAGCTGGTTGCCGGTGTCTCAAATTGTATCAAGGAGCTG
CTGCAAGACTGTGTTTCGCGCGCTTGTGCTACAGCGGAGGATGCACAGTG
CAACAGGCAAAGTGTGTCCAGGATAATTGCTTCACTGCACAAGATGCTAA
ACGCTCCATTCGGAGAGATCTCCAGATTCGTGATCCTCATCTTCTCGTTC
GTCTTTGAGGCCTGTGGAAAGCTATTCGGTTCGGAACTCACACCCCCGCT
GATGACAATCTGCAAGCGCTACGACACCCAGAGTGCACATCGTCTGCAGA
TCGAGCACACTGTGATCAGTGCCATCAAGGCTTTGGGACCCGAATTGGTA
CTAACAGCTATACCGCTTGCCGATGGCAAGGGCGTCATGCAGCTTGAGCG
ATCCTGGCTGCTGCCCCTCCTCCGTGAGGGAGCCAACGGTGCCAGCCTGC
AGTTCTTCAAGGAGAAGATTGTAGCACTGGCCATGGACTGCCAACTGAAG
TGGAAGGAGTTCGCCGAGGCGAAGAACAATTCTTCATCACACATTTACGA
GCTATTGTGCTGCCAGTTGTGGGGCTTGTTCCCTGGCTTCTGTCGTCAGC
CAAGGGATCCTGAATACTTGCGGTACCTAGCTCCCACTTTGGGTGCGGCT
GTGGAAAAGAACCCGGAATTTAGGCCTCCCATTTACGATGGTCTGATGGA
GCTGCTCGGTGACAACCAAAGTGCGGAATGCCATCAGGCAATTGGCCAGT
ATGCCAAGAACTTTTTGCCTCGCCTCTTCAATATCTATACGCAGAAACCG
AATGGAACCTACGAGGCCGATCAGCGCAAGCGTGTTCTGGAAGTCATTCG
TTTGTATATTTCCCGGGCGCCGGCTGATGTCCAACTGGAGCTCTTTGAGA
ACGCCCAAGAGCAATTGGCTGCCAGTGCCTTGGCCAGTTTCGAATACGAC
GCTTTCTTTGACATTAATGCTGCCATAGTGCGCGTGCAAACATGCAAGGG
AATCAAAGCATATTTCGATAAGTACATGGCTCCCATTCTGAGGAACGATA
AATCGAAATTGGTCGCCAAAGATGAGCAGAAACTGAAAAAGCAGCAAAGG
AAGACCTACGAACTACTTCGCGAACTGATGACCTCGGAGCTGCCATCATG
CCAGAAGTTTACCCGCAAGAACAGCATTGTCCTGCAGCAAATCCTTCTCG
ATTCATTTAACACCAGCTGCAACGTTTGTCAGGCATCGCGTTTGCACTGC
CTGAAGTCCCTGATAGACTGCCACAGCAATCTGGCGTACAACGATCAACT
TGTGATGAAGGCCATTCCGGAGGCAGTGCTCAACTATAAGGAATTCTCCA
ATTACAAGGAACAGGTGGCCGAGCAGCTAATCAAATCTATTACTCAACTT
TATCACGATGCCGGCAAGATTAACGACTTTGTTGATATACTGACGGCAGG
ATTTGCCGGCGATGAAATGCTGGTGACGAACACAATTTTGGCCTTTAGGG
CTGTGCTCCAGCAGCAGGGTGAGCACTTGACAGTGGCCACTCTGGAGTTT
GTCCTGCAGCAGGTCTCTGTTTTCCTCGTCCAGAAGTCACGCAAGCAAGC
GGAGGCAGCCATTGCCTTTCTGATTACATTCATCAAAGTGATGCCCATAC
CACTGGTGGCCAATCACCTGGAGGCAATTATGCGTTCCTTGTCGGCCATG
ACCAAGGATACGAAGCGATACTGCCGCATCCAGATCGGTTATTTGCTTAA
GAAGCTCTGCATTCGTTTTAGCCCCGGGGAGCTGGCCGGCTTCGTTCCCG
GCGATGACGATGTAATCCATCGCCGGCTGAAGATGATCCGCAAGCGTACG
CGCAGGGATTTGCGCAAGAAACAGAACTTGGAAGCGCAGGAGGATAGCTC
CGATGATGAGCTGGTCAGCGGTCTGCAGGAAAAGAGCTACACCATTGATG
ATATGCTAGCTGACTCCGATTCGGATCTGCCCGAAGATATGGACGCTAAG
GATGAGGCCGGAGCTGCAGCCGCAGCTAGCAAGCGTAGCAAGAATGCTAA
GCAACAGAAGAGCACTTACATTCGCGAGGATCCCGATGAGATAGTCGATT
TGGCCGATCTCAAGTCCATTGGCAATGTGCTGACCAGTGGCTCCGCTCAA
ACGGCCACCCCTGCCCAGAGTCAAAAGACGAAAGCTCAGCTGCCGAACGG
TGGCTTCAAGACTGCCGACGATGGACGCCTGATCATCAGCGACAAGGCAC
TTCGTGGCCAGGGCGGTAACGATCAGTCCGATGACGACTCGGATTCCGAT
GCATCCATGGCGTATGGCACTGTAGCCAAGCAGCCCAAGGTTAAGCGTGG
CATGGAAGACGATTCGAGCGACGAAGATAAACTGCAGCAGAAGCTAGTAC
CCAAGCGTGTACGCAAGGGTGATGATGCGATGAGCATGAAATCGGGCAAA
ACCACTGCCAGTAGTCGCTACACTGCCGGTGGCAAGGGCATTCATCGACA
GCTGACAGCTGGAAACTCGGATGCCATGTCCGTGAAGTCAGGCAAATCCA
CCAGCCGCCCAGCGGGCAGTGAGTACGGCAGCAAGAAGGCCAAGGGTGAT
ATGAAGAAGAGCGGAAAACTGGATCCATATGCGTATATACCACTCACTAG
GAATAACCTGAACAAGAGAAAACGTTCAATGAATTCGCGAAAATTCAAGA
GCGTATTGCGAGGAGCTGGCGCTGAAAATGGAGGAGCCGGCGGTGGCCGG
GTGTCCAAGAAATACAAATAGAAGCTTTCTAGACCAT
BS20806.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:50:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2691-RB | 4155 | CG2691-PB | 1..4155 | 17..4171 | 20760 | 100 | Plus |
| CG2691-RA | 4155 | CG2691-PA | 1..4155 | 17..4171 | 20760 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:50:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2691-RB | 4545 | CG2691-RB | 103..4258 | 16..4171 | 20765 | 100 | Plus |
| CG2691-RA | 4477 | CG2691-RA | 103..4258 | 16..4171 | 20765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:50:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13622560..13623474 | 1629..715 | 4545 | 99.8 | Minus |
| X | 23542271 | X | 13621619..13622505 | 2511..1625 | 4420 | 99.9 | Minus |
| X | 23542271 | X | 13623543..13624107 | 722..158 | 2825 | 100 | Minus |
| X | 23542271 | X | 13619738..13620272 | 4068..3534 | 2675 | 100 | Minus |
| X | 23542271 | X | 13620924..13621356 | 3079..2647 | 2165 | 100 | Minus |
| X | 23542271 | X | 13620593..13620855 | 3342..3080 | 1315 | 100 | Minus |
| X | 23542271 | X | 13620344..13620538 | 3533..3339 | 960 | 99.5 | Minus |
| X | 23542271 | X | 13624164..13624306 | 158..16 | 715 | 100 | Minus |
| X | 23542271 | X | 13621419..13621553 | 2646..2512 | 675 | 100 | Minus |
| X | 23542271 | X | 13619563..13619667 | 4171..4067 | 525 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:50:48 has no hits.
BS20806.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-17 10:41:32 Download gff for
BS20806.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2691-RA | 102..4250 | 17..4165 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:56:15 Download gff for
BS20806.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2691-RA | 104..4252 | 17..4165 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:55:56 Download gff for
BS20806.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2691-RA | 104..4252 | 17..4165 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:55:56 Download gff for
BS20806.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13619569..13619665 | 4069..4165 | 100 | <- | Minus |
| X | 13619738..13620272 | 3534..4068 | 100 | <- | Minus |
| X | 13620344..13620534 | 3343..3533 | 100 | <- | Minus |
| X | 13620593..13620855 | 3080..3342 | 100 | <- | Minus |
| X | 13620924..13621356 | 2647..3079 | 100 | <- | Minus |
| X | 13621419..13621553 | 2512..2646 | 100 | <- | Minus |
| X | 13621619..13622500 | 1630..2511 | 100 | <- | Minus |
| X | 13622560..13623470 | 719..1629 | 99 | <- | Minus |
| X | 13623547..13624106 | 159..718 | 100 | <- | Minus |
| X | 13624164..13624305 | 17..158 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:56:15 Download gff for
BS20806.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13514626..13514888 | 3080..3342 | 100 | <- | Minus |
| arm_X | 13513602..13513698 | 4069..4165 | 100 | <- | Minus |
| arm_X | 13513771..13514305 | 3534..4068 | 100 | <- | Minus |
| arm_X | 13514377..13514567 | 3343..3533 | 100 | <- | Minus |
| arm_X | 13514957..13515389 | 2647..3079 | 100 | <- | Minus |
| arm_X | 13515452..13515586 | 2512..2646 | 100 | <- | Minus |
| arm_X | 13515652..13516533 | 1630..2511 | 100 | <- | Minus |
| arm_X | 13516593..13517503 | 719..1629 | 99 | <- | Minus |
| arm_X | 13517580..13518139 | 159..718 | 100 | <- | Minus |
| arm_X | 13518197..13518338 | 17..158 | 100 | | Minus |
BS20806.pep Sequence
Translation from 16 to 4170
> BS20806.pep
MGKFRSKLKRNGKGKTWSRGESATSNPTQMKHRMKAKSRFFQPNLSLAAA
TTTGLTMEAVHKHEQSQAFNAETTTVNDVAGSLRSFKLDDDDDGMSGSGT
APTGTAPTGTIKTFQTFASNYSGCSNTCFQKLVTSFRSSSALHKEMLAIL
SALTEIIRENGGGESSTEYFLLLMEQIEAATEERDIVAGVTLLAMGINSV
PAPVLKKRFAQTADTMQRLLQRFMESTNQSVIRHVIGCLSVILRAQDYAA
WSYSSTFQYFDAILAFSIHSQPKIRKAAQHAIALIIHGSCFMLPAIKSDD
NEMDEAVEQPKVKHHPASSRVAKFCLAQFKPEVLANAQTTVLHTLELLKD
TLYGFKTEDIRSVCEHLLSIMTAANVLVRTNCFQTLYSLFLKKSPNLNAS
LCAKLLAAIHEYRPDKSDIRQTIAWVTVLKEGHLHLATMQLDLCMQALPR
LIDVCTTDLWLSDQKELVAGVSNCIKELLQDCVSRACATAEDAQCNRQSV
SRIIASLHKMLNAPFGEISRFVILIFSFVFEACGKLFGSELTPPLMTICK
RYDTQSAHRLQIEHTVISAIKALGPELVLTAIPLADGKGVMQLERSWLLP
LLREGANGASLQFFKEKIVALAMDCQLKWKEFAEAKNNSSSHIYELLCCQ
LWGLFPGFCRQPRDPEYLRYLAPTLGAAVEKNPEFRPPIYDGLMELLGDN
QSAECHQAIGQYAKNFLPRLFNIYTQKPNGTYEADQRKRVLEVIRLYISR
APADVQLELFENAQEQLAASALASFEYDAFFDINAAIVRVQTCKGIKAYF
DKYMAPILRNDKSKLVAKDEQKLKKQQRKTYELLRELMTSELPSCQKFTR
KNSIVLQQILLDSFNTSCNVCQASRLHCLKSLIDCHSNLAYNDQLVMKAI
PEAVLNYKEFSNYKEQVAEQLIKSITQLYHDAGKINDFVDILTAGFAGDE
MLVTNTILAFRAVLQQQGEHLTVATLEFVLQQVSVFLVQKSRKQAEAAIA
FLITFIKVMPIPLVANHLEAIMRSLSAMTKDTKRYCRIQIGYLLKKLCIR
FSPGELAGFVPGDDDVIHRRLKMIRKRTRRDLRKKQNLEAQEDSSDDELV
SGLQEKSYTIDDMLADSDSDLPEDMDAKDEAGAAAAASKRSKNAKQQKST
YIREDPDEIVDLADLKSIGNVLTSGSAQTATPAQSQKTKAQLPNGGFKTA
DDGRLIISDKALRGQGGNDQSDDDSDSDASMAYGTVAKQPKVKRGMEDDS
SDEDKLQQKLVPKRVRKGDDAMSMKSGKTTASSRYTAGGKGIHRQLTAGN
SDAMSVKSGKSTSRPAGSEYGSKKAKGDMKKSGKLDPYAYIPLTRNNLNK
RKRSMNSRKFKSVLRGAGAENGGAGGGRVSKKYK*
BS20806.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:17:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2691-PB | 1384 | CG2691-PB | 1..1384 | 1..1384 | 7053 | 100 | Plus |
| CG2691-PA | 1384 | CG2691-PA | 1..1384 | 1..1384 | 7053 | 100 | Plus |
