BS20821.complete Sequence
770 bp assembled on 2011-01-18
GenBank Submission: KX805146
> BS20821.complete
GAAGTTATCAGTCGACATGGCCAAGCCCAAGTCAAAATCGACTAGCAAAG
GTTCCACTTCGCCGGGTTTTAACAAGGCGGTGCAGTTGCTCCTCCATTTT
ACAGCCGTGCTGCAGTTCAACTATGGCGTGTACATCTTCCACACACTCGA
CATGCCCAACACGGTGCCCTTCGGCGGAAAATTTAAGTTCCTAACTTTTA
TTTGTGCGATAATTCAGGCACTGTACTATATTGTATCGCTGGTCAACGAT
TTCGTGGGCACTAATGAGCTGACACCCAAGAAACCTCCGGCGGTTCGCAG
GTTCAAGGACTGGCTGATGGCTACATTGGCCTTTCCAGTGGCTATCAATG
TGGGCGTGACCTTCTGGACACTGTACGCTATCGACAGGGAGCTAGTCTTC
CCCAAGGTTCTGGACCCCGTGTTCCCCAGCTGGCTCAACCACGTCCTGCA
CACCAACATAGTGGTTTTCATCATCCTGGAGCTGTTCATCTCGTACAGGT
CGTACCCAAAACGAAGCCAAGGACTCGCAGGACTGGCCATTTTCATGGGC
GCCTACCTGGTTTGGATTCACGTGGTGAAGCACTACTCGGGTGTGTGGGT
GTATCCAGTGCTCGAGGTTCTCCAGCTTCCGCAACGCATCCTGTTTTTTG
CGGCCGTCGTTGGATTCACGCTGTCACTTTACCTGCTGGGCGAGTTCCTC
AACAATACCGTCTGGGCCAAGGAAGTGAAGTTGGCCAAGCGCAAATCCAA
CTAGAAGCTTTCTAGACCAT
BS20821.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:13:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3625-RA | 738 | CG3625-PA | 1..738 | 17..754 | 3690 | 100 | Plus |
CG3625-RB | 747 | CG3625-PB | 198..747 | 205..754 | 2750 | 100 | Plus |
CG3625-RE | 744 | CG3625-PE | 198..744 | 208..754 | 2735 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3625-RA | 995 | CG3625-RA | 32..771 | 15..754 | 3700 | 100 | Plus |
CG3625-RB | 1341 | CG3625-RB | 291..840 | 205..754 | 2750 | 100 | Plus |
CG3625-RE | 1401 | CG3625-RE | 354..900 | 208..754 | 2735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 283886..284213 | 754..427 | 1640 | 100 | Minus |
2L | 23513712 | 2L | 284748..284969 | 429..208 | 1110 | 100 | Minus |
2L | 23513712 | 2L | 286303..286500 | 212..15 | 975 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:13:55 has no hits.
BS20821.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:22 Download gff for
BS20821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3625-RA | 30..767 | 17..754 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:06 Download gff for
BS20821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3625-RA | 34..771 | 17..754 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:15 Download gff for
BS20821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3625-RA | 34..771 | 17..754 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:15 Download gff for
BS20821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 283886..284210 | 430..754 | 100 | <- | Minus |
2L | 284748..284968 | 209..429 | 100 | <- | Minus |
2L | 286307..286498 | 17..208 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:06 Download gff for
BS20821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 283886..284210 | 430..754 | 100 | <- | Minus |
arm_2L | 284748..284968 | 209..429 | 100 | <- | Minus |
arm_2L | 286307..286498 | 17..208 | 100 | | Minus |
BS20821.pep Sequence
Translation from 16 to 753
> BS20821.pep
MAKPKSKSTSKGSTSPGFNKAVQLLLHFTAVLQFNYGVYIFHTLDMPNTV
PFGGKFKFLTFICAIIQALYYIVSLVNDFVGTNELTPKKPPAVRRFKDWL
MATLAFPVAINVGVTFWTLYAIDRELVFPKVLDPVFPSWLNHVLHTNIVV
FIILELFISYRSYPKRSQGLAGLAIFMGAYLVWIHVVKHYSGVWVYPVLE
VLQLPQRILFFAAVVGFTLSLYLLGEFLNNTVWAKEVKLAKRKSN*
BS20821.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3625-PA | 245 | CG3625-PA | 1..245 | 1..245 | 1280 | 100 | Plus |
CG3625-PB | 248 | CG3625-PB | 3..248 | 8..245 | 1049 | 84.1 | Plus |
CG3625-PE | 247 | CG3625-PE | 15..247 | 25..245 | 967 | 82.1 | Plus |
CG3625-PC | 247 | CG3625-PC | 15..247 | 25..245 | 967 | 82.1 | Plus |
CG11601-PC | 275 | CG11601-PC | 26..270 | 8..243 | 572 | 42.9 | Plus |