BS20823.complete Sequence
485 bp assembled on 2011-01-18
GenBank Submission: KX805226
> BS20823.complete
GAAGTTATCAGTCGACATGGTCTTCCTGAACCTTCCCTTGCTGGTACGGT
CCCGTGGTCCGGACGAATTCTGGCGGAAGAGACGCATCTTCAAGCTGGCA
GCGCATTATAGAAGCCGCACTCGCAATGTCTACTCCTTCGCCATCCGGAG
TGTCCATAGGGCACTGGCCTATGCCACCAAGGGGCGAAAGCTAAAGAAAC
TGGACATGGCGCAACTGTGGAGCACACGCGTGGAGGCGGGTTGTCAGCAG
TATGGAGTAGGTCTGGAAACCTTCAAAGAGGGCCTCGCGCGCTCCGATAT
TCTGCTCAACAAAAAAGTCCTATCCGACCTCGCCATTTGGGAGCCGCGAT
CTTTTGAAGCTCTAGTAAAGATCTCTCGAGAGCGGGCAGCTGTGGAGGGA
ATGCCAGACATCAAACGGAGATCGGCATTTAACCAGGTCTATGGACTGAG
CAACCTGAAGTTGGATTAAAAGCTTTCTAGACCAT
BS20823.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:13:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL20-RA | 453 | CG11258-PA | 1..453 | 17..469 | 2265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL20-RA | 602 | CG11258-RA | 105..558 | 16..469 | 2270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13017404..13017613 | 312..103 | 1050 | 100 | Minus |
| 3L | 28110227 | 3L | 13017193..13017349 | 469..313 | 785 | 100 | Minus |
| 3L | 28110227 | 3L | 13017676..13017763 | 103..16 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:13:50 has no hits.
BS20823.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:21 Download gff for
BS20823.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL20-RA | 72..522 | 17..467 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:03 Download gff for
BS20823.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL20-RA | 106..556 | 17..467 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:14 Download gff for
BS20823.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL20-RA | 106..556 | 17..467 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:14 Download gff for
BS20823.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13017195..13017349 | 313..467 | 100 | <- | Minus |
| 3L | 13017404..13017612 | 104..312 | 100 | <- | Minus |
| 3L | 13017676..13017762 | 17..103 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:03 Download gff for
BS20823.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13010295..13010449 | 313..467 | 100 | <- | Minus |
| arm_3L | 13010504..13010712 | 104..312 | 100 | <- | Minus |
| arm_3L | 13010776..13010862 | 17..103 | 100 | | Minus |
BS20823.pep Sequence
Translation from 16 to 468
> BS20823.pep
MVFLNLPLLVRSRGPDEFWRKRRIFKLAAHYRSRTRNVYSFAIRSVHRAL
AYATKGRKLKKLDMAQLWSTRVEAGCQQYGVGLETFKEGLARSDILLNKK
VLSDLAIWEPRSFEALVKISRERAAVEGMPDIKRRSAFNQVYGLSNLKLD
*
BS20823.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL20-PA | 150 | CG11258-PA | 1..150 | 1..150 | 762 | 100 | Plus |
