BS20835.complete Sequence
584 bp assembled on 2011-01-18
GenBank Submission: KX806444
> BS20835.complete
GAAGTTATCAGTCGACATGGCTGAAAGTCAGGAATCCCCGCAGGATTCGT
CGGTCTCGTCACGCATCACGCTCTTCAACCAACAAGCTGAGCAGCATAAA
AACTGGATGATGATAAACCCCTTTGCCCATTACAACGTCAACGAGATGCC
CAAGAGGACCTTTCCAGAGGAGGAATACGGCAGAGCTCCGACGGGCAGTC
TTTCCGAGCAGAGATCCTTGCAGGCCAATGTACGTGCTCTGGAGGAGATT
CTCCAACTGTGCGATTTGATACAGAAATCCGGTCGTGATGATCCCATTGA
TGGCCGAAAGGTACTAGCTTTCGGGCAACTATTTGAAACTTACAACAATA
TCTCCGACAAGTTGCTTGCCACTCTGTTGGGTGCCCGAAAGTATGGGTTC
GTAGACTTTAGCGGAGAAACCCTTTTTCAAGGTCGTGATGATACAGAACC
CGTCCGCCTGCTTCGCCCCTTCGAGGAGCTCCAAGCCGAAATCATTTCCA
AGGTCGCCGATCTGCGCTGCGATTTCACTGAAAAACCGGAGGAACCGACT
CTGCTTCGCGAGGATTAGAAGCTTTCTAGACCAT
BS20835.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:14:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2113-RA | 552 | CG2113-PA | 1..552 | 17..568 | 2760 | 100 | Plus |
| CG2113-RB | 540 | CG2113-PB | 13..540 | 41..568 | 2640 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2113-RA | 926 | CG2113-RA | 79..630 | 17..568 | 2760 | 100 | Plus |
| CG2113-RB | 914 | CG2113-RB | 91..618 | 41..568 | 2640 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2995321..2995859 | 30..568 | 2695 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:14:00 has no hits.
BS20835.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:22 Download gff for
BS20835.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2113-RA | 71..622 | 17..568 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:09 Download gff for
BS20835.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2113-RA | 79..630 | 17..568 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:18 Download gff for
BS20835.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2113-RA | 79..630 | 17..568 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:18 Download gff for
BS20835.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2995323..2995859 | 32..568 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:09 Download gff for
BS20835.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2995323..2995859 | 32..568 | 100 | | Plus |
BS20835.pep Sequence
Translation from 16 to 567
> BS20835.pep
MAESQESPQDSSVSSRITLFNQQAEQHKNWMMINPFAHYNVNEMPKRTFP
EEEYGRAPTGSLSEQRSLQANVRALEEILQLCDLIQKSGRDDPIDGRKVL
AFGQLFETYNNISDKLLATLLGARKYGFVDFSGETLFQGRDDTEPVRLLR
PFEELQAEIISKVADLRCDFTEKPEEPTLLRED*
BS20835.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2113-PA | 183 | CG2113-PA | 1..183 | 1..183 | 943 | 100 | Plus |
| CG2113-PB | 179 | CG2113-PB | 1..179 | 1..183 | 907 | 97.8 | Plus |
| CG3630-PD | 371 | CG3630-PD | 16..190 | 10..183 | 367 | 41.2 | Plus |
| CG3630-PC | 371 | CG3630-PC | 16..190 | 10..183 | 367 | 41.2 | Plus |
| CG3630-PA | 371 | CG3630-PA | 16..190 | 10..183 | 367 | 41.2 | Plus |
