Clone BS20901 Report

Search the DGRC for BS20901

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:209
Well:1
Vector:pDNR-Dual
Associated Gene/TranscriptCG14400-RA
Protein status:BS20901.pep: full length peptide match
Sequenced Size:773

Clone Sequence Records

BS20901.complete Sequence

773 bp assembled on 2011-01-18

GenBank Submission: KX803254

> BS20901.complete
GAAGTTATCAGTCGACATGATTGCTACGTTGCTTTTAGTATTCCCCCTGC
TGTTTATGCCGTCTGATGCAACGTTAGGAACGCAGGTGATCAGCTATGAC
AACAAGCGGATGCTTCAGCTGATCGAGGACTTTAACGGCACCGTATCCGA
GCAGCTCTTCCTGGTGGTGTCCACGTGGGGAAAACTGAAAGCCGACTACC
CTAGAGATGTGGCTAAGATCGAGGATTTGGAGGAGACTCTGCAGCATGTG
GTGTGCCGGAAGGAGAGAAACGTGACAGTTCGTCATCACCTGCAGGGTTA
TCTCATCCGCGAACAGATCCGCGAGCATCTGGAGACCCTCAACTGCTCTG
ATCTGTTCCAGCAAGCATTGCAATCCGAGGATCATGAGCTGGGCAAGTGG
CAGTTGGCTATAGGACAGCATTCCCGTAAACTCCACTGTGTGTTTAAGCC
AGACCAACTGACAAGGATCCTGAAGGCAGTGATTCGTCGGACGTACACCC
TGGAGAGATCCACCAGGCTGGCTGCGCTTCTCTACCAGCTGTATATCGGC
AATCGAGAGTCCTATGCTGCAATGGTCGAAGCCGAGTTGATGCTTTACGA
GCGATATAAGAGTGGTGAAAAAAATAGCCAAGAATTCAGCGGATACATGG
CTAAACTCTGGCAAAGTATCCAAATTGAGGAGTTCTATCCGGGGTTGGAT
CAAAACACAAAACAACGACTTGTTGACGCAATTATAGACCTTCTGAAATT
CCTCTAAAAGCTTTCTAGACCAT

BS20901.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:14:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG14400-RA 741 CG14400-PA 1..741 17..757 3705 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG14400-RA 905 CG14400-RA 1..741 17..757 3705 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:12
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20857151..20857895 757..13 3710 99.9 Minus
Blast to na_te.dros performed on 2014-11-26 16:14:13 has no hits.

BS20901.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:24 Download gff for BS20901.complete
Subject Subject Range Query Range Percent Splice Strand
CG14400-RA 1..739 17..755 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:16 Download gff for BS20901.complete
Subject Subject Range Query Range Percent Splice Strand
CG14400-RA 1..739 17..755 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:23 Download gff for BS20901.complete
Subject Subject Range Query Range Percent Splice Strand
CG14400-RA 1..739 17..755 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:23 Download gff for BS20901.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20857153..20857891 17..755 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:16 Download gff for BS20901.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20857153..20857891 17..755 100   Minus

BS20901.pep Sequence

Translation from 16 to 756

> BS20901.pep
MIATLLLVFPLLFMPSDATLGTQVISYDNKRMLQLIEDFNGTVSEQLFLV
VSTWGKLKADYPRDVAKIEDLEETLQHVVCRKERNVTVRHHLQGYLIREQ
IREHLETLNCSDLFQQALQSEDHELGKWQLAIGQHSRKLHCVFKPDQLTR
ILKAVIRRTYTLERSTRLAALLYQLYIGNRESYAAMVEAELMLYERYKSG
EKNSQEFSGYMAKLWQSIQIEEFYPGLDQNTKQRLVDAIIDLLKFL*

BS20901.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG14400-PA 246 CG14400-PA 1..246 1..246 1259 100 Plus