Clone BS20902 Report

Search the DGRC for BS20902

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:209
Well:2
Vector:pDNR-Dual
Associated Gene/TranscriptCG14463-RA
Protein status:BS20902.pep: full length peptide match
Sequenced Size:698

Clone Sequence Records

BS20902.complete Sequence

698 bp assembled on 2011-01-18

GenBank Submission: KX803462

> BS20902.complete
GAAGTTATCAGTCGACATGGAGCCCAAAGTGACGATCCACAGATATTATA
GCCGGCAAGCGAAATATGAAGGAGCCGTGGAAGCGGACTTGGAACTGTGC
ATCAAGCACTGCGGCGGCGACGTGGTTCGCATCGAACTGGTGAACCGGCT
GCATGGAATCCAACTGCAGCGCAAGTTGCGTCGACTACTGCTGCTCATGT
TCCTATCTATCGCTTATTTTGTGGGGACCTGCGGGTTTGATAACAGAACG
ATTAGTTTCCTGCAGCCCCGTATTCTGTACCCACTGATAACGTGTGCTTC
CGTGGCCATCCTGCTCATCCGATCCACTCTGAACCTGGTGCAGGCTGAGC
GGTTGTTCTACAGCTGGGACATGGCACTCCAAATGGAGACGGTGCGCTCC
TTTGGCAGGGAATCGGTCCTCTGCGTCCAAAGGGGACACATCGAGGACAT
AGTGCTAAACGAAGTTATTGAAGACTTGGACGTAAAGTACATGCTTATAT
TACGTACAAAAGGAAGTCAATTCAAGAAGCGCCCTATAATACCCCTATTC
AATAGTCAATCCCCCTCAATTGAGTGTCTGCAGCACACATATCACGTGCT
GCATAAATATTGGCTGAACAGCACCAAAGACCGGTCAGAAGAGTCCTACA
GCAAGGACAAGCAGTCCTTAGTGAATTCGTAGAAGCTTTCTAGACCAT

BS20902.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:14:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG14463-RB 666 CG14463-PB 1..666 17..682 3330 100 Plus
CG14463-RA 666 CG14463-PA 1..666 17..682 3330 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG14463-RB 1091 CG14463-RB 214..879 17..682 3330 100 Plus
CG14463-RA 755 CG14463-RA 25..690 17..682 3330 100 Plus
Kmn2-RD 574 CG42550-RD 270..398 682..554 645 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8000045..8000503 17..475 2295 100 Plus
3R 32079331 3R 8000724..8000852 554..682 645 100 Plus
3R 32079331 3R 8000586..8000663 476..553 390 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:14:17 has no hits.

BS20902.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:25 Download gff for BS20902.complete
Subject Subject Range Query Range Percent Splice Strand
CG14463-RA 176..841 17..682 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:18 Download gff for BS20902.complete
Subject Subject Range Query Range Percent Splice Strand
CG14463-RA 25..690 17..682 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:24 Download gff for BS20902.complete
Subject Subject Range Query Range Percent Splice Strand
CG14463-RA 25..690 17..682 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:24 Download gff for BS20902.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8000586..8000663 476..553 100 -> Plus
3R 8000724..8000852 554..682 100   Plus
3R 8000045..8000503 17..475 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:18 Download gff for BS20902.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3825767..3826225 17..475 100 -> Plus
arm_3R 3826308..3826385 476..553 100 -> Plus
arm_3R 3826446..3826574 554..682 100   Plus

BS20902.pep Sequence

Translation from 16 to 681

> BS20902.pep
MEPKVTIHRYYSRQAKYEGAVEADLELCIKHCGGDVVRIELVNRLHGIQL
QRKLRRLLLLMFLSIAYFVGTCGFDNRTISFLQPRILYPLITCASVAILL
IRSTLNLVQAERLFYSWDMALQMETVRSFGRESVLCVQRGHIEDIVLNEV
IEDLDVKYMLILRTKGSQFKKRPIIPLFNSQSPSIECLQHTYHVLHKYWL
NSTKDRSEESYSKDKQSLVNS*

BS20902.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG14463-PB 221 CG14463-PB 1..221 1..221 1138 100 Plus
CG14463-PA 221 CG14463-PA 1..221 1..221 1138 100 Plus