BS20902.complete Sequence
698 bp assembled on 2011-01-18
GenBank Submission: KX803462
> BS20902.complete
GAAGTTATCAGTCGACATGGAGCCCAAAGTGACGATCCACAGATATTATA
GCCGGCAAGCGAAATATGAAGGAGCCGTGGAAGCGGACTTGGAACTGTGC
ATCAAGCACTGCGGCGGCGACGTGGTTCGCATCGAACTGGTGAACCGGCT
GCATGGAATCCAACTGCAGCGCAAGTTGCGTCGACTACTGCTGCTCATGT
TCCTATCTATCGCTTATTTTGTGGGGACCTGCGGGTTTGATAACAGAACG
ATTAGTTTCCTGCAGCCCCGTATTCTGTACCCACTGATAACGTGTGCTTC
CGTGGCCATCCTGCTCATCCGATCCACTCTGAACCTGGTGCAGGCTGAGC
GGTTGTTCTACAGCTGGGACATGGCACTCCAAATGGAGACGGTGCGCTCC
TTTGGCAGGGAATCGGTCCTCTGCGTCCAAAGGGGACACATCGAGGACAT
AGTGCTAAACGAAGTTATTGAAGACTTGGACGTAAAGTACATGCTTATAT
TACGTACAAAAGGAAGTCAATTCAAGAAGCGCCCTATAATACCCCTATTC
AATAGTCAATCCCCCTCAATTGAGTGTCTGCAGCACACATATCACGTGCT
GCATAAATATTGGCTGAACAGCACCAAAGACCGGTCAGAAGAGTCCTACA
GCAAGGACAAGCAGTCCTTAGTGAATTCGTAGAAGCTTTCTAGACCAT
BS20902.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:14:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14463-RB | 666 | CG14463-PB | 1..666 | 17..682 | 3330 | 100 | Plus |
CG14463-RA | 666 | CG14463-PA | 1..666 | 17..682 | 3330 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14463-RB | 1091 | CG14463-RB | 214..879 | 17..682 | 3330 | 100 | Plus |
CG14463-RA | 755 | CG14463-RA | 25..690 | 17..682 | 3330 | 100 | Plus |
Kmn2-RD | 574 | CG42550-RD | 270..398 | 682..554 | 645 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8000045..8000503 | 17..475 | 2295 | 100 | Plus |
3R | 32079331 | 3R | 8000724..8000852 | 554..682 | 645 | 100 | Plus |
3R | 32079331 | 3R | 8000586..8000663 | 476..553 | 390 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:14:17 has no hits.
BS20902.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:25 Download gff for
BS20902.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14463-RA | 176..841 | 17..682 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:18 Download gff for
BS20902.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14463-RA | 25..690 | 17..682 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:24 Download gff for
BS20902.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14463-RA | 25..690 | 17..682 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:24 Download gff for
BS20902.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8000586..8000663 | 476..553 | 100 | -> | Plus |
3R | 8000724..8000852 | 554..682 | 100 | | Plus |
3R | 8000045..8000503 | 17..475 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:18 Download gff for
BS20902.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3825767..3826225 | 17..475 | 100 | -> | Plus |
arm_3R | 3826308..3826385 | 476..553 | 100 | -> | Plus |
arm_3R | 3826446..3826574 | 554..682 | 100 | | Plus |
BS20902.pep Sequence
Translation from 16 to 681
> BS20902.pep
MEPKVTIHRYYSRQAKYEGAVEADLELCIKHCGGDVVRIELVNRLHGIQL
QRKLRRLLLLMFLSIAYFVGTCGFDNRTISFLQPRILYPLITCASVAILL
IRSTLNLVQAERLFYSWDMALQMETVRSFGRESVLCVQRGHIEDIVLNEV
IEDLDVKYMLILRTKGSQFKKRPIIPLFNSQSPSIECLQHTYHVLHKYWL
NSTKDRSEESYSKDKQSLVNS*
BS20902.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14463-PB | 221 | CG14463-PB | 1..221 | 1..221 | 1138 | 100 | Plus |
CG14463-PA | 221 | CG14463-PA | 1..221 | 1..221 | 1138 | 100 | Plus |