BS20903.complete Sequence
767 bp assembled on 2011-01-18
GenBank Submission: KX805118
> BS20903.complete
GAAGTTATCAGTCGACATGGCTGAAAAAACACAAGACGCCATGCTGGCCG
AAATGGATTTGATCTTTCTGGACCACATACTGCCGAGGTGCTGCAAGGAC
ATCACCACCTCGCAAGCGTTCTACAAGGACTACACCGCCGACAAGCCGAA
GCGAACAGTCACCGCGTTCCGGAAGCAAACGGATCCCGCCCTGATCTCGG
GCCACTATGCGCACAACTTGAAGGTCCAGAAGCAGGAGTTGAAGACGCGG
ACATGGCCACGATCCATGGACTGGCGCGAGGAGTACGCGCAGTTCGTCAA
GCGCAACAAGTGGTGCAACGAGGAGATCTACAAGCTCTTCTTCGTGAACC
CGCCCGTCGACTACTTCCTCATCAGGGAATATCTGCAGGACCTGCTGAAA
ACCACCTATATGTCGGACTACTCGCCCAAAGACTACCAGTCGCTCATCAG
CCAGCGCGAGCATAGGGTCCAACTCGACGGCTCGGACGGCATTGACTATC
GGACGACCTATGGCAACTATCACAATCGTATCCAGGAGGAGGATCCGTTC
AAGTCGATCCTCATCCCAGAACCAGGATCGATTGTCAGGAGCATGGAGAT
AGGAGAGTTCGCCAAGCAGATGCGCAAGCTGTTCACTAAGTACAATCTAA
CCACCTACTACGAGACCATCTGCCTTCCGGCGCTGATAAAGGCCAAGGAT
GGTATTATGCCATCGGGGCCGATCGATCGCTACACACTTCGCAAGCACTG
AAAGCTTTCTAGACCAT
BS20903.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:14:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14676-RA | 735 | CG14676-PA | 1..735 | 17..751 | 3675 | 100 | Plus |
| CG34287-RA | 708 | CG34287-PA | 210..296 | 250..336 | 270 | 87.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14676-RA | 958 | CG14676-RA | 79..814 | 17..752 | 3680 | 100 | Plus |
| CG34287-RA | 951 | CG34287-RA | 274..360 | 250..336 | 270 | 87.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5847298..5848033 | 17..752 | 3680 | 100 | Plus |
| 3R | 32079331 | 3R | 5853605..5853691 | 250..336 | 270 | 87.4 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:14:21 has no hits.
BS20903.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:25 Download gff for
BS20903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14676-RA | 79..812 | 17..750 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:20 Download gff for
BS20903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14676-RA | 79..812 | 17..750 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:26 Download gff for
BS20903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14676-RA | 79..812 | 17..750 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:26 Download gff for
BS20903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5847298..5848031 | 17..750 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:20 Download gff for
BS20903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1673020..1673753 | 17..750 | 100 | | Plus |
BS20903.pep Sequence
Translation from 16 to 750
> BS20903.pep
MAEKTQDAMLAEMDLIFLDHILPRCCKDITTSQAFYKDYTADKPKRTVTA
FRKQTDPALISGHYAHNLKVQKQELKTRTWPRSMDWREEYAQFVKRNKWC
NEEIYKLFFVNPPVDYFLIREYLQDLLKTTYMSDYSPKDYQSLISQREHR
VQLDGSDGIDYRTTYGNYHNRIQEEDPFKSILIPEPGSIVRSMEIGEFAK
QMRKLFTKYNLTTYYETICLPALIKAKDGIMPSGPIDRYTLRKH*
BS20903.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14676-PA | 244 | CG14676-PA | 1..244 | 1..244 | 1307 | 100 | Plus |
| CG34287-PA | 235 | CG34287-PA | 2..235 | 7..244 | 619 | 50.6 | Plus |
