BS20911.complete Sequence
782 bp assembled on 2011-01-18
GenBank Submission: KX805262
> BS20911.complete
GAAGTTATCAGTCGACATGAATCGATATCATGAACTCAGCATGTCGTGGG
AAATGCTGCGCGATCTCTACGAGACCTGGCTAATCCTGGCCATTGGCATG
TTGGTGCGCTGGAATCGCTGGCGTCCGTTGATCCATGGCATGGTATCGCC
ACTGGATCCATCGCTTAAGCACATCGTGGGCGACAATGAACGCTGGGCGG
GAGTCTACTTTGGATGCGGCACACTCATGACCATCATGCAGTATCGATCA
CTTTGGGTGCGCCGGTGTCGTCACCGCGTCCACATCCTGATGCTGCTGTC
CGAAATAATGCTACTGCTCCAGCTGGTGCACTGGATCGACTGCCAGCTGT
GGCAATCCTTTCTGAGCCTCTTCGAGGAGCTCTTCATCGCCCTGGGACGC
GGTCAATGGGGCTCCTGGATCTTTTGCTGTCCGGCCGCAGTGCGCAATCT
GTTCCTGCGTGGCGATGTCTTCGATGTGTTCCGCTTGCTCGCCTCGTTCG
CCATCTTCGCCGTGGCCCTAAACTCGACAGCTGGTGAATGGCGGGTGTCC
TTGGACTTCCTGCTAATCGGCTATTTCCCAAAAACTTCACTCTGGAGGCA
GTCGCTCTATGTGGAATATAGGAGTAAGGGTTTCGAGCCCACGGGCTCGT
ACGTACTGCTACCACTTCCCCCACCCGAGCTCCTCATCTACAAGCGTATG
TGTCGCCTGTGTCTGCAGCAACTTGAAACGAATCCCACTCACCAAAAGAT
TCAGATGCCTTGTTAAAAGCTTTCTAGACCAT
BS20911.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:14:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Andorra-RA | 750 | CG12611-PA | 1..750 | 17..766 | 3750 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Andorra-RA | 947 | CG12611-RA | 39..789 | 17..767 | 3755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18178684..18179434 | 767..17 | 3755 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 16:14:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6740..6885 | 429..285 | 115 | 54.1 | Minus |
BS20911.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:24 Download gff for
BS20911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Andorra-RA | 39..786 | 17..764 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:14 Download gff for
BS20911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Andorra-RA | 39..786 | 17..764 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:21 Download gff for
BS20911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Andorra-RA | 39..786 | 17..764 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:21 Download gff for
BS20911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18178687..18179434 | 17..764 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:14 Download gff for
BS20911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18072720..18073467 | 17..764 | 100 | | Minus |
BS20911.pep Sequence
Translation from 16 to 765
> BS20911.pep
MNRYHELSMSWEMLRDLYETWLILAIGMLVRWNRWRPLIHGMVSPLDPSL
KHIVGDNERWAGVYFGCGTLMTIMQYRSLWVRRCRHRVHILMLLSEIMLL
LQLVHWIDCQLWQSFLSLFEELFIALGRGQWGSWIFCCPAAVRNLFLRGD
VFDVFRLLASFAIFAVALNSTAGEWRVSLDFLLIGYFPKTSLWRQSLYVE
YRSKGFEPTGSYVLLPLPPPELLIYKRMCRLCLQQLETNPTHQKIQMPC*
BS20911.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Andorra-PA | 249 | CG12611-PA | 1..249 | 1..249 | 1357 | 100 | Plus |