BS20914.complete Sequence
782 bp assembled on 2011-01-18
GenBank Submission: KX803841
> BS20914.complete
GAAGTTATCAGTCGACATGAACTGCAAGCTACGCCGCCTGGACCTGTTGC
GGAATGGCCAAAAGTCGGACTGCGAGCTCCATGTCTCGCAACCGGACAAG
TTGAAGGAGGGCAAGCGTTGTCCATGCATTTTCCGCTGCCACCAGGTGAT
GCTCATCTCCGCCTCCGCGGAGTTCGAGCGCCTGATCAGGGATCCCGAGT
TCCAGAAGAACAAGCGAGTGATCAGCGTGGACGACGCCTCTCCCACCGCC
TACGAGGCGTTGCTCCTCTACATCTACACGTACGAGGTGTGCAATGCGGT
GACCATCGACATGTGCGGTGACCTCATGCTGCTGGCCGAGCGCTACGAGA
TGCTGGACTTCATCGACTGCTACATCGACAAGCTGGCCCACCAGGAGTGG
CCCATGGAGGTGGTTCTGCAGGTCTTCCACCTGGCCAGCGAGCACCACCA
TCCGGCACTGATGGATCTCGTGGCGAAAAAAATCCTCCCCGTAGCCACGC
AGGTGCTCATGGACAACTCGTTCCTCAAGCTGAGTGTTAAGGAGCTAAAG
GCTCTGATGATAATCCTGAAAAAGGATGGAGATCTCTCCGATCACGAACT
GCTGACCTCGCTGAAGAACTACCAGGATGTGAACAACCTGCGCTACGAGG
ACATGGAGCAGTTCCAGCAGCTCGTTGAGGTAACCCAGTTGTTCGGTCAC
GTTCTCTTCGAAGTGGATGGCACCATAGTTGTGCCCGAAGAAGAAAAACC
TTCGCCGGAGGAATAGAAGCTTTCTAGACCAT
BS20914.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:14:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14260-RA | 750 | CG14260-PA | 1..750 | 17..766 | 3750 | 100 | Plus |
| CG14260-RB | 501 | CG14260-PB | 1..462 | 17..478 | 2310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14260-RA | 919 | CG14260-RA | 31..781 | 17..767 | 3755 | 100 | Plus |
| CG14260-RB | 903 | CG14260-RB | 31..765 | 17..767 | 3480 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27265487..27265948 | 17..478 | 2310 | 100 | Plus |
| 3R | 32079331 | 3R | 27265997..27266285 | 479..767 | 1445 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:14:48 has no hits.
BS20914.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:29 Download gff for
BS20914.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14260-RA | 31..780 | 17..766 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:31 Download gff for
BS20914.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14260-RA | 31..780 | 17..766 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:35 Download gff for
BS20914.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14260-RA | 31..780 | 17..766 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:35 Download gff for
BS20914.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27265487..27265948 | 17..478 | 100 | -> | Plus |
| 3R | 27265997..27266284 | 479..766 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:31 Download gff for
BS20914.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23091209..23091670 | 17..478 | 100 | -> | Plus |
| arm_3R | 23091719..23092006 | 479..766 | 100 | | Plus |
BS20914.pep Sequence
Translation from 16 to 765
> BS20914.pep
MNCKLRRLDLLRNGQKSDCELHVSQPDKLKEGKRCPCIFRCHQVMLISAS
AEFERLIRDPEFQKNKRVISVDDASPTAYEALLLYIYTYEVCNAVTIDMC
GDLMLLAERYEMLDFIDCYIDKLAHQEWPMEVVLQVFHLASEHHHPALMD
LVAKKILPVATQVLMDNSFLKLSVKELKALMIILKKDGDLSDHELLTSLK
NYQDVNNLRYEDMEQFQQLVEVTQLFGHVLFEVDGTIVVPEEEKPSPEE*
BS20914.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14260-PA | 249 | CG14260-PA | 1..249 | 1..249 | 1296 | 100 | Plus |
| CG14260-PB | 166 | CG14260-PB | 1..154 | 1..154 | 821 | 100 | Plus |
| CG14262-PA | 312 | CG14262-PA | 76..309 | 6..237 | 262 | 29.6 | Plus |
