BS20915.complete Sequence
554 bp assembled on 2011-01-18
GenBank Submission: KX801763
> BS20915.complete
GAAGTTATCAGTCGACATGAAGTGGACAACGGGTCTGCTCTTGGCGGTGG
CCATGCTCAGCCTGCCATCTCGGGGAGATTCATCCCGAAATCTCACGGAA
TTCATGGGACATCGACAGAAGCGCTGGCTGATCTACCAGAATAGTGGGTC
TTTGAAGTTTAGTATTGGTCCCTCGATGCCCATACCCTTGGGGGACAAGG
TGACCTTCCGTTCCTGTGTGCTCTCCTACACGCTCCAAGGTGGTTCCTAT
TCCCTGCCCACATCACCCATCTGGCCGTGGGATAAGTGGGAAGGCACCTT
CGCTCGTTCCTTGATGCAAATGCGAAGGAATATTGAGCGCCATGTGGCCA
ATGGCGGAGTGCGATATGCGGACGATGCCAGGCTCTTGGTCTACACTGCA
CTGGAGGAGTATATGGGCAGGAGGAACAATGACCGCTCCATGGGCAGACA
ATGTCTGCTGCGCTCCATATGCGAGAATGCTCAGATCCATCATCATATCG
GTGTGTTCTCGGAAATTATGGATATTGTACTCAGGTAAAAGCTTTCTAGA
CCAT
BS20915.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:14:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14826-RC | 660 | CG14826-PC | 1..518 | 17..534 | 2590 | 100 | Plus |
| CG14826-RA | 660 | CG14826-PA | 1..518 | 17..534 | 2590 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14826-RC | 1074 | CG14826-RC | 21..539 | 16..534 | 2595 | 100 | Plus |
| CG14826-RA | 1022 | CG14826-RA | 272..790 | 16..534 | 2595 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7234783..7235308 | 16..541 | 2630 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:14:52 has no hits.
BS20915.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:29 Download gff for
BS20915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14826-RB | 273..792 | 17..536 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:33 Download gff for
BS20915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14826-RA | 273..791 | 17..536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:37 Download gff for
BS20915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14826-RA | 273..791 | 17..536 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:37 Download gff for
BS20915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7234784..7235303 | 17..536 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:33 Download gff for
BS20915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7227884..7228403 | 17..536 | 100 | | Plus |
BS20915.pep Sequence
Translation from 16 to 537
> BS20915.pep
MKWTTGLLLAVAMLSLPSRGDSSRNLTEFMGHRQKRWLIYQNSGSLKFSI
GPSMPIPLGDKVTFRSCVLSYTLQGGSYSLPTSPIWPWDKWEGTFARSLM
QMRRNIERHVANGGVRYADDARLLVYTALEEYMGRRNNDRSMGRQCLLRS
ICENAQIHHHIGVFSEIMDIVLR*
BS20915.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14826-PC | 219 | CG14826-PC | 1..172 | 1..172 | 914 | 100 | Plus |
| CG14826-PA | 219 | CG14826-PA | 1..172 | 1..172 | 914 | 100 | Plus |
| CG14829-PB | 219 | CG14829-PB | 30..172 | 24..172 | 361 | 44.7 | Plus |
| CG13869-PA | 215 | CG13869-PA | 23..165 | 25..173 | 184 | 31.6 | Plus |
| CG17784-PA | 237 | CG17784-PA | 47..189 | 21..172 | 141 | 32.5 | Plus |
