BS20916.complete Sequence
761 bp assembled on 2011-01-18
GenBank Submission: KX801039
> BS20916.complete
GAAGTTATCAGTCGACATGAAACAGATAGAGCTCAAGGATGTGCCGACAG
TTCGCATCCTGATGTTGGGCGACAGAGGTGTGGGCAAGACTAGTTTGACC
AATTTGATGGCCACTACGGAAATTACGCCCACTCCAGACTCGCGAACCGT
TGGCGAGGAGTCGTGGCATGTCCAGGTGCGGTTGCATGAGTATTCCAAGC
CGGTGATCCTGCCGCCCACGCCCACCTGGACAACGCCCTCCTCGTCGGAG
GACTCCGAGAATTACCCGTATATGCGGAGTACGCCCACCACCACGAATAT
CCTGTACTTTGTCGAGTTCTACGACCTGAACAGCGATTGGCGCATGTGCC
GCCAGCAGCGCGAAAGCTTCTATAAGAATATTGACGGCATCGTCCTCGTG
TACAACATGCTGGAACTGAGCTCCCAGGACAGCCTGCACGATTGGCTGTA
CGATCCGTTGCGACAGATCTGCAAGCATCGACATCTGCGCATCCGTTCCA
TATTGAAAAACCATAATGCGCCCATTCTGGTGGTGGGCACCAACCTGGAC
AAGCTGATGCGACGACCACTGCGTCGAAGGGGCAGCATTGCCCACCAGTT
AAACGTCGAGGAGATGCTCGTCAATTGCCTGGATCCCCAAAGCTTTGTGG
ACAAGAGCCGTAATCAGGGCAAACTGTACGGCTTCCTAAACCGCGTCATC
GAGTTCAAGGAGCAATTTCCACTGTTAAGTTTCCGCCACTTGTGAAAGCT
TTCTAGACCAT
BS20916.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:14:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15399-RA | 729 | CG15399-PA | 1..729 | 17..745 | 3645 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15399-RA | 824 | CG15399-RA | 42..770 | 17..745 | 3645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2770938..2771607 | 745..76 | 3350 | 100 | Minus |
| 2L | 23513712 | 2L | 2771672..2771735 | 80..17 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:14:56 has no hits.
BS20916.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:30 Download gff for
BS20916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15399-RA | 42..769 | 17..744 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:35 Download gff for
BS20916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15399-RA | 42..769 | 17..744 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:39 Download gff for
BS20916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15399-RA | 42..769 | 17..744 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:39 Download gff for
BS20916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2771675..2771735 | 17..77 | 100 | | Minus |
| 2L | 2770939..2771605 | 78..744 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:35 Download gff for
BS20916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2770939..2771605 | 78..744 | 100 | <- | Minus |
| arm_2L | 2771675..2771735 | 17..77 | 100 | | Minus |
BS20916.pep Sequence
Translation from 16 to 744
> BS20916.pep
MKQIELKDVPTVRILMLGDRGVGKTSLTNLMATTEITPTPDSRTVGEESW
HVQVRLHEYSKPVILPPTPTWTTPSSSEDSENYPYMRSTPTTTNILYFVE
FYDLNSDWRMCRQQRESFYKNIDGIVLVYNMLELSSQDSLHDWLYDPLRQ
ICKHRHLRIRSILKNHNAPILVVGTNLDKLMRRPLRRRGSIAHQLNVEEM
LVNCLDPQSFVDKSRNQGKLYGFLNRVIEFKEQFPLLSFRHL*
BS20916.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15399-PA | 242 | CG15399-PA | 1..242 | 1..242 | 1281 | 100 | Plus |
| CG4789-PA | 274 | CG4789-PA | 7..226 | 12..229 | 200 | 28.9 | Plus |
