BS20917.complete Sequence
539 bp assembled on 2011-01-18
GenBank Submission: KX805527
> BS20917.complete
GAAGTTATCAGTCGACATGAAGTTCTATCCGAATGCAGATGTCTGGTTCT
GTGTGGACAAGACCAGCTGCTTGAACAGCTATCAAAAGTATCCACCCACG
CACAGCTGGAAGATTCACGATCGGACCACCGCGCGGGAAATGTACTATTG
GCGCGACATCGAGGGCGTGAAGAAGACGGAGATCAAGCTTAAGGATCTGT
ACTTCACCAATTGGCCCAAAACCCGCATCCGTCCACAGGCCTGCTTGGGA
TTGCTCTATGCCACGGGCAACAGATTCATCCGACTGACCAAGGCACCACC
AGCGGGCTTCAAGTGTGCACCACTGCCCGTCAATCTGGCCACCGCTCGAA
TTGTCAAAGTGGAGCTGCGCAAGAAGGCGAAGCGCGAAAAACAGGCAGCT
AAAAAGGCTAAAAAGGAAGCGAAGAAGGCCAAGAAGGCGGGCAAAAAGGG
CAAAGGAAAGGGCGGTAATGGCGATCTTAAGCCAAAGGTCATTAGGACAT
ACGAAGACGCCGAGAAAGCATAAAAGCTTTCTAGACCAT
BS20917.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:15:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16739-RA | 507 | CG16739-PA | 1..507 | 17..523 | 2535 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:15:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16739-RA | 695 | CG16739-RA | 114..621 | 16..523 | 2540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:15:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20342106..20342449 | 16..359 | 1720 | 100 | Plus |
2R | 25286936 | 2R | 20342510..20342675 | 358..523 | 830 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:15:01 has no hits.
BS20917.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:31 Download gff for
BS20917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16739-RA | 80..584 | 17..521 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:37 Download gff for
BS20917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16739-RA | 115..619 | 17..521 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:42 Download gff for
BS20917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16739-RA | 115..619 | 17..521 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:42 Download gff for
BS20917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20342107..20342449 | 17..359 | 100 | -> | Plus |
2R | 20342512..20342673 | 360..521 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:37 Download gff for
BS20917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16229612..16229954 | 17..359 | 100 | -> | Plus |
arm_2R | 16230017..16230178 | 360..521 | 100 | | Plus |
BS20917.pep Sequence
Translation from 16 to 522
> BS20917.pep
MKFYPNADVWFCVDKTSCLNSYQKYPPTHSWKIHDRTTAREMYYWRDIEG
VKKTEIKLKDLYFTNWPKTRIRPQACLGLLYATGNRFIRLTKAPPAGFKC
APLPVNLATARIVKVELRKKAKREKQAAKKAKKEAKKAKKAGKKGKGKGG
NGDLKPKVIRTYEDAEKA*
BS20917.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16739-PA | 168 | CG16739-PA | 1..168 | 1..168 | 904 | 100 | Plus |