BS20919.complete Sequence
770 bp assembled on 2011-01-18
GenBank Submission: KX801079
> BS20919.complete
GAAGTTATCAGTCGACATGCTGCTCAAAGGCATTCTTCTATTAGTTTCCA
TTGCTCAAATAGCAGCAGATTTCAAATCGATTGGCATTGAACAAGCTCCC
TGGCAGGCTTCCGTTCAAATAAACGACAAACATCACTGCGGAGGAGTGAT
ATACAGCGAAGATATCATCCTGACCATTGCCGAGTGTGTGAGAAAGGCCA
GATTGGAATTCATCTCGGTGCGAGTGGGGTCTGCCCAGGAAAACGCCGGT
GGCACTGTGCTGAAGGTCGAGAAGATGAGGCTGCAAGTACTTGGCCTGCG
TCCCAGTGATGTGGCCATACTCCAGCTGAGATCGCCGCTGTACTTGGACG
GCGGAATTCGGGCCATTCCCTTGGCCACCATACCATTAGTGCCGGGAACG
AATGCCTCCGTTTCGGGTTGGGGTCAACTCTCTGCCATGAATCCTTCGTC
GGAAGTTTTACTGAGAGTCGATGTAAAAATCCAAGATCAATTGATGTGCG
CGACAAACCTTGCTCTGAAGGGCAGACTTATGAGTGTGGGCGAGATCTGC
GCAGCACCTGCGGGAGAAATTCCCTACGCCTGTCAAGGATTCGTCGGCGG
TCCTTTGGTTGCCAATAATCGGCTGTATGGAATCCTTTCCTGGCAAAGTG
CCTGCGACGTCCTCAATAAATCTAGTGTCTATGCCAATATCGCGATGTTC
AAAGTGTGGATTGAATCCACTGTTAAGCTAATGAATTTCTTCAGAATAGG
CTAGAAGCTTTCTAGACCAT
BS20919.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:15:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17242-RA | 738 | CG17242-PA | 1..738 | 17..754 | 3690 | 100 | Plus |
| CG17242-RB | 738 | CG17242-PB | 1..738 | 17..754 | 3690 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:15:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17242-RA | 842 | CG17242-RA | 48..785 | 17..754 | 3690 | 100 | Plus |
| CG17242-RB | 1035 | CG17242-RB | 48..785 | 17..754 | 3690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:15:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2268356..2269093 | 754..17 | 3690 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:15:04 has no hits.
BS20919.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:31 Download gff for
BS20919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17242-RA | 27..764 | 17..754 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:39 Download gff for
BS20919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17242-RB | 27..764 | 17..754 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:43 Download gff for
BS20919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17242-RB | 48..785 | 17..754 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:43 Download gff for
BS20919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2268356..2269093 | 17..754 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:39 Download gff for
BS20919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2268356..2269093 | 17..754 | 100 | | Minus |
BS20919.pep Sequence
Translation from 16 to 753
> BS20919.pep
MLLKGILLLVSIAQIAADFKSIGIEQAPWQASVQINDKHHCGGVIYSEDI
ILTIAECVRKARLEFISVRVGSAQENAGGTVLKVEKMRLQVLGLRPSDVA
ILQLRSPLYLDGGIRAIPLATIPLVPGTNASVSGWGQLSAMNPSSEVLLR
VDVKIQDQLMCATNLALKGRLMSVGEICAAPAGEIPYACQGFVGGPLVAN
NRLYGILSWQSACDVLNKSSVYANIAMFKVWIESTVKLMNFFRIG*
BS20919.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17242-PA | 245 | CG17242-PA | 1..245 | 1..245 | 1238 | 100 | Plus |
| CG17242-PB | 245 | CG17242-PB | 1..245 | 1..245 | 1238 | 100 | Plus |
| CG17239-PB | 248 | CG17239-PB | 1..242 | 1..237 | 355 | 36 | Plus |
| CG17239-PA | 248 | CG17239-PA | 1..242 | 1..237 | 355 | 36 | Plus |
| alphaTry-PA | 256 | CG18444-PA | 39..252 | 24..235 | 344 | 38 | Plus |
