Clone BS20924 Report

Search the DGRC for BS20924

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:209
Well:24
Vector:pDNR-Dual
Associated Gene/TranscriptCG30184-RA
Protein status:BS20924.pep: full length peptide match
Sequenced Size:704

Clone Sequence Records

BS20924.complete Sequence

704 bp assembled on 2011-01-18

GenBank Submission: KX805568

> BS20924.complete
GAAGTTATCAGTCGACATGCAGGTGCGCTCCAAGAAGCCCGTTTGGTTCC
TGTTCAAGATGATGGAGCTGCTGCTGAGCCTGGGCTGCTGCCTCGTCCAT
TGGACCTGCTTCATGGAGGAGGGTGTGCCGCACATCTTCCTGCTGTGCGG
AACGTACGGCGGCTCGGTGATCATATGCTTCATATCACTGATTGGAGCTT
TCTACGCCGAGCGGCCGACGATGAAGCACGAGGCGCTGTTCGGTGGGATC
TTGGGTGGCCTGCACATGGTCACCGTGTACGCCAACATGTATGTGGCCAC
TTTGGAGGAGTTCCGCACTGAGCGCTGGCCCAGCTTCTATGCGTGCTGTC
GGGACAACGCCATTGTGGCTCTGTACGCCGGCGCCATTTATCTGATGCAC
TGCACCTTCGCTCTGGATCTCATGTTCTCCCACTCACGCAGTCGGGCGAA
TCAGAAGATGCATCCACAGCGGAGCAAGCGACCACTGCAGCTGTACTTCA
TCAGCCGGGGCGCGGAGGCCTATCTCAGTCGCTTCTGGTTCTTTCGGCGC
ATCGCCGCCAGGATGCTGACCAGCGCCCAGCCATCGGAGCATTCCGGCCG
GAAGCGGCAGGTCTCGTCCTCCGAGTCGGACTCGGATGCCAAGGAGAGGG
AGGAGGAGCGGATTAGGAACTCGGAGGTTTTCAAATAGAAGCTTTCTAGA
CCAT

BS20924.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:14:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG30184-RA 672 CG30184-PA 1..672 17..688 3360 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG30184-RA 808 CG30184-RA 105..778 15..688 3370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23564077..23564750 15..688 3370 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:14:43 has no hits.

BS20924.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:28 Download gff for BS20924.complete
Subject Subject Range Query Range Percent Splice Strand
CG30184-RA 51..716 17..682 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:30 Download gff for BS20924.complete
Subject Subject Range Query Range Percent Splice Strand
CG30184-RA 51..716 17..682 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:34 Download gff for BS20924.complete
Subject Subject Range Query Range Percent Splice Strand
CG30184-RA 107..772 17..682 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:34 Download gff for BS20924.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23564079..23564744 17..682 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:30 Download gff for BS20924.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19451602..19452267 17..682 100   Plus

BS20924.pep Sequence

Translation from 16 to 687

> BS20924.pep
MQVRSKKPVWFLFKMMELLLSLGCCLVHWTCFMEEGVPHIFLLCGTYGGS
VIICFISLIGAFYAERPTMKHEALFGGILGGLHMVTVYANMYVATLEEFR
TERWPSFYACCRDNAIVALYAGAIYLMHCTFALDLMFSHSRSRANQKMHP
QRSKRPLQLYFISRGAEAYLSRFWFFRRIAARMLTSAQPSEHSGRKRQVS
SSESDSDAKEREEERIRNSEVFK*

BS20924.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG30184-PA 223 CG30184-PA 1..223 1..223 1183 100 Plus