BS20925.complete Sequence
671 bp assembled on 2011-01-18
GenBank Submission: KX804423
> BS20925.complete
GAAGTTATCAGTCGACATGGAGGATAGCGGCATCGATAGCGAGGACAGAC
AATCCAACATCTACGAGGATGGGGCTGCGGGACTCTTGAAAACGGCCAGC
GGAGCACCCAAACATATGTCAGATCTGGAGTTTGAGGTGGCATTCAGGGG
TGCCGGCAAGGTCTATGCCCCCACGACCATAGAAATCGATGAAGAGGAGG
AAGCGACCGCAGGAAGCGGTCGAGGCCACGAGCCACCCAACACCTGCCGC
ATACTGCAGCGCAAACTGGAGCTGAAGGTCGAGCGGGCCCGGCGGAACTA
CACTCAGTTTCAGGCGGAGCAGGCTACCAAGACGCAGTCGTCCACTCTGA
TACCAATCAACCGTCTACCCATTCCTGGCGAGCCGGAACACAAGCCACTG
GTGGACTACAAATCCGAGAGTAGCGACGAGGCCGAGGAGATCTCCTTCTT
TCCGGCCCAGCTGAAGCGGTCCAAGCGCCGCCAGCAGAACCACGAACTGA
CTGACACCTTCAGCATACAGGAGATGACCATTGACTCGGATCTGGAGTCG
GACGACAGTGCTGGCACCCAGAACCTCGAGCTCCTGCTGCCCTCCATGAA
GACGACCATTCTGGACAAGTTTAAGGGATGCTTCGGATGCTGGCGGCGCA
GGTAAAAGCTTTCTAGACCAT
BS20925.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:15:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31051-RA | 639 | CG31051-PA | 1..639 | 17..655 | 3195 | 100 | Plus |
| CG31051-RB | 657 | CG31051-PB | 1..657 | 17..655 | 2980 | 97.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:15:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31051-RA | 835 | CG31051-RA | 89..727 | 17..655 | 3195 | 100 | Plus |
| CG31051-RB | 853 | CG31051-RB | 89..745 | 17..655 | 2980 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:15:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28519656..28519991 | 655..320 | 1680 | 100 | Minus |
| 3R | 32079331 | 3R | 28520050..28520285 | 323..88 | 1180 | 100 | Minus |
| 3R | 32079331 | 3R | 28520356..28520427 | 88..17 | 360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:15:27 has no hits.
BS20925.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:34 Download gff for
BS20925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31051-RA | 89..725 | 17..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:50 Download gff for
BS20925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31051-RA | 89..725 | 17..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:52 Download gff for
BS20925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31051-RA | 89..725 | 17..653 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:52 Download gff for
BS20925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28519658..28519988 | 323..653 | 100 | <- | Minus |
| 3R | 28520051..28520284 | 89..322 | 100 | <- | Minus |
| 3R | 28520356..28520427 | 17..88 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:50 Download gff for
BS20925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24345380..24345710 | 323..653 | 100 | <- | Minus |
| arm_3R | 24345773..24346006 | 89..322 | 100 | <- | Minus |
| arm_3R | 24346078..24346149 | 17..88 | 100 | | Minus |
BS20925.pep Sequence
Translation from 16 to 654
> BS20925.pep
MEDSGIDSEDRQSNIYEDGAAGLLKTASGAPKHMSDLEFEVAFRGAGKVY
APTTIEIDEEEEATAGSGRGHEPPNTCRILQRKLELKVERARRNYTQFQA
EQATKTQSSTLIPINRLPIPGEPEHKPLVDYKSESSDEAEEISFFPAQLK
RSKRRQQNHELTDTFSIQEMTIDSDLESDDSAGTQNLELLLPSMKTTILD
KFKGCFGCWRRR*
BS20925.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31051-PA | 212 | CG31051-PA | 1..212 | 1..212 | 1095 | 100 | Plus |
| CG31051-PB | 218 | CG31051-PB | 1..218 | 1..212 | 1078 | 97.2 | Plus |
