Clone BS20926 Report

Search the DGRC for BS20926

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:209
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG31229-RA
Protein status:BS20926.pep: gold
Sequenced Size:620

Clone Sequence Records

BS20926.complete Sequence

620 bp assembled on 2011-01-18

GenBank Submission: KX800994

> BS20926.complete
GAAGTTATCAGTCGACATGTCCGTGCTGCCCAACGCCGGAAACAATGAAT
CGTCGGTGACGGCGCCCAAAATGTTTGGCGATCCGGATTTGGATCGCATG
GCGATGGAGTACGTCGGAAACATGCAGCGCTACCGCGAGAACATCATAAT
CCCCAAGAGCAACGGCCCCGTGAAGATCAAGACCAACGAGGAGAAGTTCA
TCGAAACGGCGGTGGAGAGCTGTGGATTCAAATGCACCATGGCCTGTGTG
ATGGGCTATGGCTTGGGTGCAGCTTTGGGTTTGTTTAGCGCCTCCGTTAA
TCCCAACATGGCCGATCCGTTCGCGAATGAGAAGAAGCAGACGGCCAGGG
AGGTTTTCCGCGAAATGCGCTCCACCACCCATTCCTACGCGAAGAATTTC
GCGCTCATCGGCTGTGTGTTCTCCGCCGTCGAGTGCACCATCGAGAGCCA
TCGGGGCGTCACGGACTGGAAGAATGGCACCTACGCTGGAGGCATCACTG
GAGGACTGATTGGTTTGCGGGCTGGCGTTAAGGCGGGCATCATCGGCGGC
CTGGGATTCGCCGCCTTCTCCACGGCCATCGACTACTACATGTATTCTAG
ATAGAAGCTTTCTAGACCAT

BS20926.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:15:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG31229-RA 588 CG31229-PA 1..588 17..604 2940 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:15:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG31229-RA 777 CG31229-RA 134..721 17..604 2940 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:15:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18667985..18668223 17..255 1195 100 Plus
3R 32079331 3R 18668608..18668802 254..448 975 100 Plus
3R 32079331 3R 18668872..18669027 449..604 780 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:15:32 has no hits.

BS20926.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:35 Download gff for BS20926.complete
Subject Subject Range Query Range Percent Splice Strand
CG31229-RA 113..700 17..604 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:52 Download gff for BS20926.complete
Subject Subject Range Query Range Percent Splice Strand
CG31229-RA 113..700 17..604 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:54 Download gff for BS20926.complete
Subject Subject Range Query Range Percent Splice Strand
CG31229-RA 134..721 17..604 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:54 Download gff for BS20926.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18667985..18668222 17..254 100 -> Plus
3R 18668609..18668802 255..448 100 -> Plus
3R 18668872..18669027 449..604 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:52 Download gff for BS20926.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14493707..14493944 17..254 100 -> Plus
arm_3R 14494331..14494524 255..448 100 -> Plus
arm_3R 14494594..14494749 449..604 100   Plus

BS20926.pep Sequence

Translation from 16 to 603

> BS20926.pep
MSVLPNAGNNESSVTAPKMFGDPDLDRMAMEYVGNMQRYRENIIIPKSNG
PVKIKTNEEKFIETAVESCGFKCTMACVMGYGLGAALGLFSASVNPNMAD
PFANEKKQTAREVFREMRSTTHSYAKNFALIGCVFSAVECTIESHRGVTD
WKNGTYAGGITGGLIGLRAGVKAGIIGGLGFAAFSTAIDYYMYSR*

BS20926.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG31229-PA 195 CG31229-PA 1..195 1..195 1021 100 Plus