BS20927.complete Sequence
773 bp assembled on 2011-01-18
GenBank Submission: KX803913
> BS20927.complete
GAAGTTATCAGTCGACATGAAGGACTGCGTCGAAATTTTCGAAGGGGAGT
TTGAGGTCCTTCGTGTAACTCCACCGCTTTATGATGAAGTTGAAGAGCTG
CTTGTGAACATTTCGATCAATTATGAGTTCGGATGTGTGATCGCTAAACT
TAAAGACTCTCCGTTGGCCATTGCCGAGCTAGGTAAACTAATAAGGCACA
TCATATCCCGAGGAATATCATTCGCTATACGACACGTGGAAAGTGGCAGA
ATTGTGGCTGCAATCGCTAATATAATATTTAATACAAAGAGGAAAACCTC
ATACTACGACATTTGCGCCCAGATCAAGAGTCCAAACATGATAAAGTACA
TGGAACTTTGGGATGCTGTCGATGCGAGCTTTAATGTCAACGAGCACTGC
CAGGTGGACAGCACGGGAGATGTGGAATACATGGCCACTTTGCCGGAGTT
CAGACGACGTGGCCTGGGCCACATCTTATGCCAGCAGTCCATCCAGTTCG
CAAGTCTCTTGGCCCAGCGGAAGCTTCCTCTTGAGATACTCAACCAGCTG
CCTGAGGAGATGCGGATTGAAAGACCGCAGGCCATTGTCGCAATAACTAC
ATCCCAATCCTCGCAAATAATGGGCAGACAATTGGGAATGAAAACTATGC
ATAAGTGGCATTTTTCCGAGCTGAGGTCCTTGTGCGGAGCGATGGCGGAG
TCCAATGGCGCAGCCCAGGCCTTTGAATATGCAGAACTGCAAGTAGTAAA
GTTTTGAAAGCTTTCTAGACCAT
BS20927.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:15:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31493-RA | 741 | CG31493-PA | 1..741 | 17..757 | 3705 | 100 | Plus |
CG31493-RB | 657 | CG31493-PB | 181..657 | 281..757 | 2385 | 100 | Plus |
CG31493-RB | 657 | CG31493-PB | 1..166 | 17..182 | 830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:15:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31493-RA | 1005 | CG31493-RA | 116..856 | 17..757 | 3705 | 100 | Plus |
CG31493-RB | 921 | CG31493-RB | 296..772 | 281..757 | 2385 | 100 | Plus |
CG31493-RB | 921 | CG31493-RB | 116..281 | 17..182 | 830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:15:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7132070..7132546 | 281..757 | 2385 | 100 | Plus |
3R | 32079331 | 3R | 7131824..7132008 | 96..280 | 925 | 100 | Plus |
3R | 32079331 | 3R | 7131675..7131755 | 17..97 | 405 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:15:36 has no hits.
BS20927.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:35 Download gff for
BS20927.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31493-RA | 116..855 | 17..756 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:54 Download gff for
BS20927.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31493-RA | 116..855 | 17..756 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:56 Download gff for
BS20927.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31493-RA | 116..855 | 17..756 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:56 Download gff for
BS20927.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7131675..7131755 | 17..97 | 100 | -> | Plus |
3R | 7131826..7132008 | 98..280 | 100 | -> | Plus |
3R | 7132070..7132545 | 281..756 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:54 Download gff for
BS20927.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2957397..2957477 | 17..97 | 100 | -> | Plus |
arm_3R | 2957548..2957730 | 98..280 | 100 | -> | Plus |
arm_3R | 2957792..2958267 | 281..756 | 100 | | Plus |
BS20927.pep Sequence
Translation from 16 to 756
> BS20927.pep
MKDCVEIFEGEFEVLRVTPPLYDEVEELLVNISINYEFGCVIAKLKDSPL
AIAELGKLIRHIISRGISFAIRHVESGRIVAAIANIIFNTKRKTSYYDIC
AQIKSPNMIKYMELWDAVDASFNVNEHCQVDSTGDVEYMATLPEFRRRGL
GHILCQQSIQFASLLAQRKLPLEILNQLPEEMRIERPQAIVAITTSQSSQ
IMGRQLGMKTMHKWHFSELRSLCGAMAESNGAAQAFEYAELQVVKF*
BS20927.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31493-PA | 246 | CG31493-PA | 1..246 | 1..246 | 1255 | 100 | Plus |
CG31493-PB | 218 | CG31493-PB | 1..218 | 1..246 | 1051 | 87 | Plus |
CG31248-PB | 251 | CG31248-PB | 12..225 | 7..218 | 173 | 26.6 | Plus |
CG31248-PA | 251 | CG31248-PA | 12..225 | 7..218 | 173 | 26.6 | Plus |