BS20930.complete Sequence
650 bp assembled on 2011-01-18
GenBank Submission: KX802600
> BS20930.complete
GAAGTTATCAGTCGACATGAATTCCACACGGCGAGCTCGTGCCAAAATTG
TGACCAAGAAAAAGATTACTGGCCGTAAAGTGCCCAGAACAGATCCGCAG
CAGCAGTTTTACTTAAAAAACAGATTCAATGCAACTCGTCCTCGTCCAAA
ACAATCAACCGTGCCTCCTAGCCAGCGAATCTGGCGCAGGACAGTGGTCC
AGACCAAGCCGAAAATAAAAACAAAGATCCCCAGGCTATTTCGCATGGAT
CGGAATACAGGACTTCCGGTGGATTACGAGAGGACGGTCAACCAGGTGAT
GCAGTACGTGAATCCCAATTTGCGCAATCCACCCAGCGCGGAAAAGGTTT
TGGAGGAATTGCTGACGAAAATGCTTACTGAGGTCGTACGACAGGGTGGT
CGGTGTTGTCGAGAACACTCTCAATTGAGATCCTTGCTGAAGAACAGGTG
CCACTGCCACAGGTCGAGCCAGTTCCTAAGCAAGGCAGAGAAGGCCAGGT
TCGAGGCGAACGAGAGTCTGAGCCAATTTCATAGTGCTTGCAAACGGGGA
CCCTGTCGAATCCCCAGTACCAAACTTGGTCCCACGTACATGAGTAAGTT
CAACTTTAACCAGCTGAAAATCAAGAGCTCATAAAAGCTTTCTAGACCAT
BS20930.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:10:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15425-RA | 618 | CG15425-PA | 1..618 | 17..634 | 3090 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15425-RA | 795 | CG15425-RA | 79..698 | 17..636 | 3100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 4257650..4258173 | 17..540 | 2620 | 100 | Plus |
2L | 23513712 | 2L | 4258232..4258328 | 540..636 | 485 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:10:17 has no hits.
BS20930.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:55 Download gff for
BS20930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15425-RA | 79..694 | 17..632 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:49:28 Download gff for
BS20930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15425-RA | 79..694 | 17..632 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:47 Download gff for
BS20930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15425-RA | 79..694 | 17..632 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:47 Download gff for
BS20930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 4258233..4258324 | 541..632 | 100 | | Plus |
2L | 4257650..4258173 | 17..540 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:49:28 Download gff for
BS20930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 4257650..4258173 | 17..540 | 100 | -> | Plus |
arm_2L | 4258233..4258324 | 541..632 | 100 | | Plus |
BS20930.pep Sequence
Translation from 16 to 633
> BS20930.pep
MNSTRRARAKIVTKKKITGRKVPRTDPQQQFYLKNRFNATRPRPKQSTVP
PSQRIWRRTVVQTKPKIKTKIPRLFRMDRNTGLPVDYERTVNQVMQYVNP
NLRNPPSAEKVLEELLTKMLTEVVRQGGRCCREHSQLRSLLKNRCHCHRS
SQFLSKAEKARFEANESLSQFHSACKRGPCRIPSTKLGPTYMSKFNFNQL
KIKSS*
BS20930.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:01:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15425-PA | 205 | CG15425-PA | 1..205 | 1..205 | 1076 | 100 | Plus |