Clone BS20930 Report

Search the DGRC for BS20930

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:209
Well:30
Vector:pDNR-Dual
Associated Gene/TranscriptCG15425-RA
Protein status:BS20930.pep: full length peptide match
Sequenced Size:650

Clone Sequence Records

BS20930.complete Sequence

650 bp assembled on 2011-01-18

GenBank Submission: KX802600

> BS20930.complete
GAAGTTATCAGTCGACATGAATTCCACACGGCGAGCTCGTGCCAAAATTG
TGACCAAGAAAAAGATTACTGGCCGTAAAGTGCCCAGAACAGATCCGCAG
CAGCAGTTTTACTTAAAAAACAGATTCAATGCAACTCGTCCTCGTCCAAA
ACAATCAACCGTGCCTCCTAGCCAGCGAATCTGGCGCAGGACAGTGGTCC
AGACCAAGCCGAAAATAAAAACAAAGATCCCCAGGCTATTTCGCATGGAT
CGGAATACAGGACTTCCGGTGGATTACGAGAGGACGGTCAACCAGGTGAT
GCAGTACGTGAATCCCAATTTGCGCAATCCACCCAGCGCGGAAAAGGTTT
TGGAGGAATTGCTGACGAAAATGCTTACTGAGGTCGTACGACAGGGTGGT
CGGTGTTGTCGAGAACACTCTCAATTGAGATCCTTGCTGAAGAACAGGTG
CCACTGCCACAGGTCGAGCCAGTTCCTAAGCAAGGCAGAGAAGGCCAGGT
TCGAGGCGAACGAGAGTCTGAGCCAATTTCATAGTGCTTGCAAACGGGGA
CCCTGTCGAATCCCCAGTACCAAACTTGGTCCCACGTACATGAGTAAGTT
CAACTTTAACCAGCTGAAAATCAAGAGCTCATAAAAGCTTTCTAGACCAT

BS20930.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:10:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG15425-RA 618 CG15425-PA 1..618 17..634 3090 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG15425-RA 795 CG15425-RA 79..698 17..636 3100 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4257650..4258173 17..540 2620 100 Plus
2L 23513712 2L 4258232..4258328 540..636 485 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:10:17 has no hits.

BS20930.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:55 Download gff for BS20930.complete
Subject Subject Range Query Range Percent Splice Strand
CG15425-RA 79..694 17..632 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:49:28 Download gff for BS20930.complete
Subject Subject Range Query Range Percent Splice Strand
CG15425-RA 79..694 17..632 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:47 Download gff for BS20930.complete
Subject Subject Range Query Range Percent Splice Strand
CG15425-RA 79..694 17..632 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:47 Download gff for BS20930.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4258233..4258324 541..632 100   Plus
2L 4257650..4258173 17..540 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:49:28 Download gff for BS20930.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4257650..4258173 17..540 100 -> Plus
arm_2L 4258233..4258324 541..632 100   Plus

BS20930.pep Sequence

Translation from 16 to 633

> BS20930.pep
MNSTRRARAKIVTKKKITGRKVPRTDPQQQFYLKNRFNATRPRPKQSTVP
PSQRIWRRTVVQTKPKIKTKIPRLFRMDRNTGLPVDYERTVNQVMQYVNP
NLRNPPSAEKVLEELLTKMLTEVVRQGGRCCREHSQLRSLLKNRCHCHRS
SQFLSKAEKARFEANESLSQFHSACKRGPCRIPSTKLGPTYMSKFNFNQL
KIKSS*

BS20930.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:01:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG15425-PA 205 CG15425-PA 1..205 1..205 1076 100 Plus