Clone BS20933 Report

Search the DGRC for BS20933

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:209
Well:33
Vector:pDNR-Dual
Associated Gene/TranscriptCG17601-RA
Protein status:BS20933.pep: gold
Sequenced Size:695

Clone Sequence Records

BS20933.complete Sequence

695 bp assembled on 2011-01-18

GenBank Submission: KX801739

> BS20933.complete
GAAGTTATCAGTCGACATGGCCCCAAGGAAACGGATCTCGAGGATTGCAT
CACGCAGTGTGGCGACTGTGGAGCAGTTCACTAAGCGCATCAACTGCCGC
TCGGTTGGCACCCAAACCGATATCCTGGCTAAGGGTCCGGCGAAGCGCAA
AAAGGTCGAGAACAAGGTCAAGCTGCTGGATTCGCAGCCACTGTCGTCCC
AGTACTTGGCCATCCATCTGATGCCGGCAATCAATCCACTGGCAACTGAA
ACAATAAATCGGCGTCCGGATACATTCTCATATTTTCTCCCCGGTCCAAA
TGAGAAGTCTTGCCAGGCTGTGGCCGACCGAATCGCTGACGCAAGCGATC
GGGTCATCACCGCTAGCTCCGGAGAACGGCAAATAAACCACCTGAAGTCT
GTGGTGAGCAACCGCCGCGAAGAGGCCAACCAGTGGGATCGTAACCGTCT
TGAAATTCTGCTGGCCCAGATCAATGGTGACCCGCCGCCGCGCTGGAACT
CGGCCACCCAATTGTGGCTAGAGGTTGACATGCTGGAGAAGCGCATAGAG
GCCTACGACCAAGAAGAACTGCAGAATGCCAAGAATCGCAATTTGGACAG
GAAGCTAGACGGTGGGCAGGATAAGGGGCCGTCAGATGAAAAGGACCAGC
AGACTTTGAAGACTTTGAAGGCAACGTAGAAGCTTTCTAGACCAT

BS20933.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:10:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG17601-RA 663 CG17601-PA 1..663 17..679 3315 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG17601-RA 960 CG17601-RA 34..696 17..679 3315 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:25
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 22547130..22547792 17..679 3315 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:10:26 has no hits.

BS20933.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:56 Download gff for BS20933.complete
Subject Subject Range Query Range Percent Splice Strand
CG17601-RA 34..696 17..679 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:49:33 Download gff for BS20933.complete
Subject Subject Range Query Range Percent Splice Strand
CG17601-RA 34..696 17..679 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:50 Download gff for BS20933.complete
Subject Subject Range Query Range Percent Splice Strand
CG17601-RA 34..696 17..679 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:50 Download gff for BS20933.complete
Subject Subject Range Query Range Percent Splice Strand
X 22547130..22547792 17..679 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:49:33 Download gff for BS20933.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21948966..21949628 17..679 100   Plus

BS20933.pep Sequence

Translation from 16 to 678

> BS20933.pep
MAPRKRISRIASRSVATVEQFTKRINCRSVGTQTDILAKGPAKRKKVENK
VKLLDSQPLSSQYLAIHLMPAINPLATETINRRPDTFSYFLPGPNEKSCQ
AVADRIADASDRVITASSGERQINHLKSVVSNRREEANQWDRNRLEILLA
QINGDPPPRWNSATQLWLEVDMLEKRIEAYDQEELQNAKNRNLDRKLDGG
QDKGPSDEKDQQTLKTLKAT*

BS20933.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:01:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG17601-PA 220 CG17601-PA 1..220 1..220 1124 100 Plus