BS20934.complete Sequence
671 bp assembled on 2011-01-18
GenBank Submission: KX805855
> BS20934.complete
GAAGTTATCAGTCGACATGATAAGTTTCCTGAAATTGGCCAGGAATCCTG
GCCAGCTGCTGCTGCCTGGCAGTGGAGTGCTGCAATCCCAGTGGCTTCGT
GGCCAGAAGACCATGCCGGTGTACGATTACCGTTGCCAAAATCCGCCAAA
GTGGGGCTACTCGGCCTTCGGACGCAACCAGAAGACCTGGGGCGAGTGGA
CCTGTGCCAGGTTGGATGACCTGCTAAACTGGGGACGCAAGGGATCCCTC
TGGCCGCTGACCTTTGGTCTCGCCTGCTGCGCCGTCGAAATGATGCACAT
TGCGGCTCCTCGCTACGACATGGATCGCTACGGTGTGGTGTTCCGAGCAT
CTCCTCGCCAGGCGGACGTGCTCATCGTGGCCGGAACCCTGACCAACAAG
ATGGCACCGGCCTTTCGGAAGATCTACGACCAGATGCCCGAGCCGAGATG
GGTCATTTCCATGGGCAGTTGCGCCAATGGTGGCGGCTACTACCACTACT
CCTACTCGGTGGTTCGCGGCTGCGATCGCATTGTTCCGGTGGACATCTAC
GTGCCCGGATGTCCGCCCACCGCCGAGGCCTTAATGTACGGAATCCTGCA
GCTGCAGAAGAAGGTAAAGCGCATGAGGACCCTGCAGATGTGGTACAGGA
AGTAGAAGCTTTCTAGACCAT
BS20934.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:15:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2014-RB | 639 | CG2014-PB | 1..639 | 17..655 | 3195 | 100 | Plus |
| CG2014-RA | 639 | CG2014-PA | 1..639 | 17..655 | 3195 | 100 | Plus |
| CG9172-RC | 666 | CG9172-PC | 217..665 | 206..654 | 1090 | 82.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:15:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2014-RB | 753 | CG2014-RB | 71..710 | 17..656 | 3200 | 100 | Plus |
| CG2014-RA | 715 | CG2014-RA | 33..672 | 17..656 | 3200 | 100 | Plus |
| CG9172-RC | 1282 | CG9172-RC | 295..743 | 206..654 | 1090 | 82.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:15:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29515845..29516484 | 17..656 | 3200 | 100 | Plus |
| X | 23542271 | X | 15986012..15986460 | 654..206 | 1090 | 82.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:15:13 has no hits.
BS20934.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:32 Download gff for
BS20934.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2014-RA | 33..671 | 17..655 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:44 Download gff for
BS20934.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2014-RA | 33..671 | 17..655 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:46 Download gff for
BS20934.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2014-RA | 33..671 | 17..655 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:46 Download gff for
BS20934.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29515845..29516483 | 17..655 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:44 Download gff for
BS20934.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25341567..25342205 | 17..655 | 100 | | Plus |
BS20934.pep Sequence
Translation from 16 to 654
> BS20934.pep
MISFLKLARNPGQLLLPGSGVLQSQWLRGQKTMPVYDYRCQNPPKWGYSA
FGRNQKTWGEWTCARLDDLLNWGRKGSLWPLTFGLACCAVEMMHIAAPRY
DMDRYGVVFRASPRQADVLIVAGTLTNKMAPAFRKIYDQMPEPRWVISMG
SCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALMYGILQLQKKV
KRMRTLQMWYRK*
BS20934.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2014-PB | 212 | CG2014-PB | 1..212 | 1..212 | 1171 | 100 | Plus |
| CG2014-PA | 212 | CG2014-PA | 1..212 | 1..212 | 1171 | 100 | Plus |
| CG9172-PC | 221 | CG9172-PC | 37..221 | 27..212 | 873 | 85.5 | Plus |
| CG9172-PA | 221 | CG9172-PA | 37..221 | 27..212 | 873 | 85.5 | Plus |
| CG9172-PB | 221 | CG9172-PB | 37..221 | 27..212 | 873 | 85.5 | Plus |
