BS20937.complete Sequence
701 bp assembled on 2011-01-18
GenBank Submission: KX800345
> BS20937.complete
GAAGTTATCAGTCGACATGAGCCAAATCAGCAAACTAACCCACATAAGCC
GCATAAGCCAAAACAATCAGTCGGACGGGAGTGATGAGGATAAGTTTCGC
CGTGCGAATTTTCCGGTTTACCCAAAACCGCTACCTGATCGAGATTTGAG
CTACAAAGCTGACGAAAATGAGTTCACAATGGTGGAGAAGGCGTCCTTGC
GGAATGCCTGGCGTTTAATTGAGCCATTTCAGCGCCGATTTGGCAAGGAA
AATTTTTACAGTTTCCTTACGAGGAACGAGGATCTCATAAACTTTTTCAG
GAAAGATGGAAAGATTAACCTGAGTAAGCTGCACGGGCATGCCATGGCAA
TGATGAAGCTGATGTCAAAGCTGGTCCAAACACTGGATTGCAATCTAGCT
TTCCGCTTGGCCTTGGATGAGAATCTTCCCACACATCTGAAGAATGGCAT
CGATCCGGATTATATGAGGATGCTGGCCACCGCACTGAAGAGTTATATCC
TTGCGTCTTCCGTTATCGAAAATCACAACTCATGTTCACTAAGCAATGGT
CTGGCCCGTCTGGTGGAGATCGTCGGTGAGTACGCCGTTGTGGATGAGGC
TAGAAAAAGAGCCATGTCCACTGCCCTTAGGACGACTGTTGACGATGCTG
GCAATCGCATTGTCAAGGTTGCTTTAGGCACTTAAAAGCTTTCTAGACCA
T
BS20937.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:10:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glob2-RB | 669 | CG15180-PB | 1..669 | 17..685 | 3345 | 100 | Plus |
| glob2-RC | 660 | CG15180-PC | 1..559 | 17..575 | 2795 | 100 | Plus |
| glob2-RD | 630 | CG15180-PD | 234..630 | 289..685 | 1955 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glob2-RB | 823 | CG15180-RB | 77..746 | 17..686 | 3350 | 100 | Plus |
| glob2-RC | 2336 | CG15180-RC | 77..635 | 17..575 | 2795 | 100 | Plus |
| glob2-RD | 784 | CG15180-RD | 310..707 | 289..686 | 1960 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6608594..6608838 | 261..17 | 1225 | 100 | Minus |
| 3R | 32079331 | 3R | 6607990..6608207 | 686..469 | 1090 | 100 | Minus |
| 3R | 32079331 | 3R | 6608334..6608543 | 469..260 | 1050 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:10:40 has no hits.
BS20937.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:57 Download gff for
BS20937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob2-RB | 77..743 | 17..683 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:49:38 Download gff for
BS20937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob2-RB | 77..743 | 17..683 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:57 Download gff for
BS20937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob2-RB | 77..743 | 17..683 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:57 Download gff for
BS20937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6608594..6608838 | 17..261 | 100 | | Minus |
| 3R | 6607993..6608206 | 470..683 | 100 | <- | Minus |
| 3R | 6608334..6608541 | 262..469 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:49:38 Download gff for
BS20937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2433715..2433928 | 470..683 | 100 | <- | Minus |
| arm_3R | 2434056..2434263 | 262..469 | 100 | <- | Minus |
| arm_3R | 2434316..2434560 | 17..261 | 100 | | Minus |
BS20937.pep Sequence
Translation from 16 to 684
> BS20937.pep
MSQISKLTHISRISQNNQSDGSDEDKFRRANFPVYPKPLPDRDLSYKADE
NEFTMVEKASLRNAWRLIEPFQRRFGKENFYSFLTRNEDLINFFRKDGKI
NLSKLHGHAMAMMKLMSKLVQTLDCNLAFRLALDENLPTHLKNGIDPDYM
RMLATALKSYILASSVIENHNSCSLSNGLARLVEIVGEYAVVDEARKRAM
STALRTTVDDAGNRIVKVALGT*
BS20937.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:01:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glob2-PB | 222 | CG15180-PB | 1..222 | 1..222 | 1132 | 100 | Plus |
| glob2-PD | 209 | CG15180-PD | 1..209 | 1..222 | 1041 | 94.1 | Plus |
| glob2-PC | 219 | CG15180-PC | 1..186 | 1..186 | 958 | 100 | Plus |
| glob3-PA | 196 | CG14675-PA | 18..169 | 35..189 | 228 | 35.5 | Plus |
