BS20938.complete Sequence
773 bp assembled on 2011-01-18
GenBank Submission: KX802464
> BS20938.complete
GAAGTTATCAGTCGACATGTCGTTGACTTCGCAATTTGTTGCGAATTTGA
AACGCTTTCGCCTGGTGACCTTCGATGTAACGGACACGCTGCTTCGCCTG
GAGGATCCCCTTCGCCAGTACCATCAGACGGCAGAGGAGTTCGGGGTCAC
CGGAGTGGATCGCCGCCGATTGGAACAATGCTTTCGCCAGCAATTCAAGG
CGATGAGCAGCGAACATCCAAACTTTGGCCGTTACTCGCCGGGATTGGAT
TGGCAGCGTTGGTGGCTTCAGCTGGTGGCTCGAACCTTTAGCTGCGTGGA
CCACGGTCTGGCGCCCGAGAAGCTGGAGAAGATCGGCCAGCGGCTAATTT
CCGTTTTTCGGACCAGCGCCTGTTGGAGTCACGTGAATGGTGCCCAGGAG
TTGGTGCAGAACGTCCGAAATGCCGGCAAATGTGTGGGCATCATCTCCAA
TTTCGATTCGTCACTGCCACAAGTCCTGGACGCCATGGGCTTTGCCGGCA
AATTCGATTTCATTCTGACTTCCTACGAAGCCGGTGTTATGAAGCCCGAA
CGCGGTATCTTCGAAATTCCGCTGCAGAGATTGCAAATTCCAGCGGAGCA
GGCCCTTCACATTGGCAACAAGTTGGATATGGACTATGAAGGTGCCCGGA
ATTGCGGCTGGAGCGGTTTGCTTGTGAGCAACGCTGACAATCCCCATTCT
TTTGCCAGTCTTTCCAGTCTGTTGGAGGCCTTAAAAACCCAACCAATCCG
ATGGTAAAAGCTTTCTAGACCAT
BS20938.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:10:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15912-RA | 741 | CG15912-PA | 1..741 | 17..757 | 3705 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15912-RA | 888 | CG15912-RA | 5..745 | 17..757 | 3705 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 4549074..4549814 | 17..757 | 3705 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:10:44 has no hits.
BS20938.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:58 Download gff for
BS20938.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15912-RA | 5..743 | 17..755 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:49:41 Download gff for
BS20938.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15912-RA | 5..743 | 17..755 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:59 Download gff for
BS20938.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15912-RA | 5..743 | 17..755 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:59 Download gff for
BS20938.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4549074..4549812 | 17..755 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:49:41 Download gff for
BS20938.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 4443107..4443845 | 17..755 | 100 | | Plus |
BS20938.pep Sequence
Translation from 16 to 756
> BS20938.pep
MSLTSQFVANLKRFRLVTFDVTDTLLRLEDPLRQYHQTAEEFGVTGVDRR
RLEQCFRQQFKAMSSEHPNFGRYSPGLDWQRWWLQLVARTFSCVDHGLAP
EKLEKIGQRLISVFRTSACWSHVNGAQELVQNVRNAGKCVGIISNFDSSL
PQVLDAMGFAGKFDFILTSYEAGVMKPERGIFEIPLQRLQIPAEQALHIG
NKLDMDYEGARNCGWSGLLVSNADNPHSFASLSSLLEALKTQPIRW*
BS20938.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:01:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15912-PA | 246 | CG15912-PA | 1..246 | 1..246 | 1297 | 100 | Plus |
Reg-2-PA | 260 | CG3200-PA | 3..260 | 10..246 | 366 | 34 | Plus |