BS20939.complete Sequence
755 bp assembled on 2011-01-18
GenBank Submission: KX804276
> BS20939.complete
GAAGTTATCAGTCGACATGGCTAACCTGATTCTATATGGCACTGAGTCCA
GTCCGCCGGTCCGTGCCGTTTTGTTGACCCTTCGTGCCCTCCAGCTGGAC
CATGAATTCCATACGCTGGACATGCAGGCCGGCGATCATCTGAAGCCGGA
TATGTTACGCAAGAATCCCCAGCACACGGTACCCATGCTGGAGGATGGTG
AGTCATGCATTTGGGACTCACACGCCATCATCGGCTATCTGGTGAACAAG
TACGCCCAGTCGGATGAGCTCTATCCAAAGGATCCGCTGAAGCGAGCTGT
GGTGGATCAGCGGCTGCATTTCGAGACCGGTGTCCTTTTTCACGGCATCT
TCAAGCAATTGCAGAGAGCTCTGTTCAAAGAGAATGCCACTGAGGTGCCC
AAGGATCGTTTGGCTGAGTTGAAGGATGCCTACGCCTTGCTGGAGCAATT
TCTGGCGGAGAATCCCTATGTGGCCGGTCCTCAGCTGACCATCGCCGATT
TTAGCATTGTGGCCACCGTGAGCACTCTGCACCTGAGCTACTGTCCCGTG
GATGCGACCAAATACCCCAAATTATCCGCCTGGTTGGCACGTATCTCCGC
ATTGCCCTTCTATGAGGAGGACAACTTGAGAGGAGCCCGCTTGTTGGCCG
ATAAGATTCGCTCCAAGCTGCCCAAGCAGTTTGACAAGCTGTGGCAAAAG
GCCTTTGAGGACATCAAGAGCGGAGCTGGAAAACAGTGAAAGCTTTCTAG
ACCAT
BS20939.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:10:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstE10-RB | 723 | CG17522-PB | 1..723 | 17..739 | 3615 | 100 | Plus |
| GstE10-RA | 723 | CG17522-PA | 1..723 | 17..739 | 3615 | 100 | Plus |
| GstE5-RA | 669 | CG17527-PA | 145..311 | 161..327 | 280 | 77.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstE10-RB | 1134 | CG17522-RB | 307..1029 | 17..739 | 3615 | 100 | Plus |
| GstE10-RA | 889 | CG17522-RA | 62..784 | 17..739 | 3615 | 100 | Plus |
| GstE5-RA | 734 | CG17527-RA | 174..340 | 161..327 | 280 | 77.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18396743..18397465 | 739..17 | 3615 | 100 | Minus |
| 2R | 25286936 | 2R | 18404778..18404944 | 161..327 | 280 | 77.8 | Plus |
| 2R | 25286936 | 2R | 18403419..18403592 | 161..334 | 270 | 77 | Plus |
| 2R | 25286936 | 2R | 18407099..18407268 | 161..330 | 250 | 76.5 | Plus |
| 2R | 25286936 | 2R | 18398582..18398705 | 161..284 | 245 | 79.8 | Plus |
| 2R | 25286936 | 2R | 18408004..18408173 | 161..330 | 205 | 74.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:10:49 has no hits.
BS20939.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:58 Download gff for
BS20939.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE10-RA | 62..783 | 17..738 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:49:43 Download gff for
BS20939.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE10-RA | 62..783 | 17..738 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:58:02 Download gff for
BS20939.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE10-RA | 62..783 | 17..738 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:58:02 Download gff for
BS20939.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18396744..18397465 | 17..738 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:49:43 Download gff for
BS20939.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14284249..14284970 | 17..738 | 100 | | Minus |
BS20939.pep Sequence
Translation from 16 to 738
> BS20939.pep
MANLILYGTESSPPVRAVLLTLRALQLDHEFHTLDMQAGDHLKPDMLRKN
PQHTVPMLEDGESCIWDSHAIIGYLVNKYAQSDELYPKDPLKRAVVDQRL
HFETGVLFHGIFKQLQRALFKENATEVPKDRLAELKDAYALLEQFLAENP
YVAGPQLTIADFSIVATVSTLHLSYCPVDATKYPKLSAWLARISALPFYE
EDNLRGARLLADKIRSKLPKQFDKLWQKAFEDIKSGAGKQ*
BS20939.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:01:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstE10-PB | 240 | CG17522-PB | 1..240 | 1..240 | 1247 | 100 | Plus |
| GstE10-PA | 240 | CG17522-PA | 1..240 | 1..240 | 1247 | 100 | Plus |
| GstE7-PA | 223 | CG17531-PA | 1..214 | 1..215 | 597 | 54.9 | Plus |
| GstE9-PA | 221 | CG17534-PA | 1..219 | 1..220 | 578 | 50.5 | Plus |
| GstE6-PA | 222 | CG17530-PA | 1..209 | 1..210 | 575 | 53.3 | Plus |
