BS20947.complete Sequence
290 bp assembled on 2011-01-18
GenBank Submission: KX801285
> BS20947.complete
GAAGTTATCAGTCGACATGTCATCGCAGTTTCGTGAGAAGCGCGGATTAG
CTAGCAGTGCCAATAATGAACTGCCCACCATGGATCCCAACGAGAGTGAC
TTCGCTCTGGAGCTGAAGCCAGCACCCAAACAGACCTGCATTCCGACGCA
CCAACGCCAGAGATTGGCCAGCTCGGACACCAACGTCTATCAGCGTGAGA
GCGTGTTTGATATACCGGACAAGTCCTGGTCAGTCCTGTACTTTGGATCC
GGCAAGGACAGTTCCTCGAAATAGAAGCTTTCTAGACCAT
BS20947.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:10:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32440-RA | 258 | CG32440-PA | 1..258 | 17..274 | 1290 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32440-RA | 633 | CG32440-RA | 185..443 | 16..274 | 1295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21360363..21360530 | 16..183 | 840 | 100 | Plus |
3L | 28110227 | 3L | 21360949..21361039 | 184..274 | 455 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 16:10:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 2352..2482 | 140..263 | 115 | 58.8 | Plus |
BS20947.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:57 Download gff for
BS20947.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32440-RA | 186..437 | 17..268 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:49:37 Download gff for
BS20947.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32440-RA | 186..437 | 17..268 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:55 Download gff for
BS20947.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32440-RA | 186..437 | 17..268 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:55 Download gff for
BS20947.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21360949..21361033 | 184..268 | 100 | | Plus |
3L | 21360364..21360530 | 17..183 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:49:37 Download gff for
BS20947.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21354049..21354133 | 184..268 | 100 | | Plus |
arm_3L | 21353464..21353630 | 17..183 | 100 | -> | Plus |
BS20947.pep Sequence
Translation from 16 to 273
> BS20947.pep
MSSQFREKRGLASSANNELPTMDPNESDFALELKPAPKQTCIPTHQRQRL
ASSDTNVYQRESVFDIPDKSWSVLYFGSGKDSSSK*
BS20947.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:01:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32440-PA | 85 | CG32440-PA | 1..85 | 1..85 | 441 | 100 | Plus |