BS20949.complete Sequence
668 bp assembled on 2011-01-18
GenBank Submission: KX804878
> BS20949.complete
GAAGTTATCAGTCGACATGGCAGGCCGCGGAAGGGGCGGCAAGACAGGCA
CCCTCACGGCGGAGCAAATGGCCATGTTGGGATGCACAAAGGATATGCCG
GTGCAGACGGCGCCGCCACCTACATTTCCGCCTGTTTTGAACAGACCCAC
TACCCTAGAAACAACAGCCACACAGAACTATCAGCTCCTGTGGAAGGAGG
ACTTTCTGAACCGAATGCGAGATTCCCCCTATTACATGATCTCCGCCAGT
CGGGACGCAAAAAACCTTGATCACAAGGACTGGCGAGAAAAAGCCATGGA
GCGCATGAAGCTCACAGCACAACCCGATTTTAACTACAAAGCCATGCCCC
AAGAGCTAAACATCTCCAGTCGAAAACGTCGTGGAGCAGATGCAAGGCCG
AATCTGCTGACCAAGAAGACAAACATCGAGGACAGACTGAAGGTTCTGGA
GCAGAAAGAACTGAAATCAGGTGGCGGTGAGCAGGACGAGAACAAACAAG
AGTCCGATTCCGAACAGGAGGAGGAGGAAGATCCGGAGGCGGCGTTGGAT
GATGAGATGGACGAGGACAACGACTACGGTGCAACGTACTTTGATAATGG
AGAAGCCTTCAATGATGAGGACGACAACTTGGACGATGGTCCCGTTTACT
GAAAGCTTTCTAGACCAT
BS20949.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:11:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33051-RA | 636 | CG33051-PA | 1..636 | 17..652 | 3180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:11:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33051-RA | 719 | CG33051-RA | 62..697 | 17..652 | 3180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:11:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17426308..17426670 | 652..290 | 1815 | 100 | Minus |
| 3L | 28110227 | 3L | 17426926..17427069 | 160..17 | 720 | 100 | Minus |
| 3L | 28110227 | 3L | 17426728..17426856 | 289..161 | 645 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:11:25 has no hits.
BS20949.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:03 Download gff for
BS20949.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33051-RA | 62..696 | 17..651 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:49:58 Download gff for
BS20949.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33051-RA | 62..696 | 17..651 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:58:15 Download gff for
BS20949.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33051-RA | 62..696 | 17..651 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:58:15 Download gff for
BS20949.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17426309..17426670 | 290..651 | 100 | <- | Minus |
| 3L | 17426728..17426856 | 161..289 | 100 | <- | Minus |
| 3L | 17426926..17427069 | 17..160 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:49:58 Download gff for
BS20949.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17419409..17419770 | 290..651 | 100 | <- | Minus |
| arm_3L | 17419828..17419956 | 161..289 | 100 | <- | Minus |
| arm_3L | 17420026..17420169 | 17..160 | 100 | | Minus |
BS20949.pep Sequence
Translation from 16 to 651
> BS20949.pep
MAGRGRGGKTGTLTAEQMAMLGCTKDMPVQTAPPPTFPPVLNRPTTLETT
ATQNYQLLWKEDFLNRMRDSPYYMISASRDAKNLDHKDWREKAMERMKLT
AQPDFNYKAMPQELNISSRKRRGADARPNLLTKKTNIEDRLKVLEQKELK
SGGGEQDENKQESDSEQEEEEDPEAALDDEMDEDNDYGATYFDNGEAFND
EDDNLDDGPVY*
BS20949.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33051-PA | 211 | CG33051-PA | 1..211 | 1..211 | 1120 | 100 | Plus |
