BS20953.complete Sequence
530 bp assembled on 2011-01-18
GenBank Submission: KX803953
> BS20953.complete
GAAGTTATCAGTCGACATGCCTCCTGTTGAAGTGAGCATACGCCAAGGAG
TTGCGTTTTTGGGCTTGTATGTGCTGCTCCTGGCTGCTTTGGTGCGTCCC
CAGATGAACTTCAGCATATTCGTGGACTCGTTCTTCCTGCAGGTCAATCA
CTCGGTGGTAATGGTGCTGAGCTACCGGTTTGATTCCTATATGGCGATGG
CCGCCGCACCACTCAGTGCCGTTACGGTGTTTGCCCTTTCCAAGTGGAAC
GAACGTTGCGAGAATCCCTCCTCCAGGAAGCTAGTGATCATGGGCGTGAC
ATGCTTGTATGTCTTGGTGCTGGTGGCCAATGTCCTGGCCAATGGAATAG
TGGTTCAGCAGGCGTTGATCCGCTTCGATCAATGTCCGTATCGGGCGTGG
TATATGTACAGCCAGATGGCCATGTCCTTTATCAAATCCTCGATTGCAGA
AGTCCAGGAAGTTTTCACCGGACGGCCTCAACGTCGGTCCCGACTTATAT
ATCGTTTGCATTAGAAGCTTTCTAGACCAT
BS20953.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:11:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5388-RB | 498 | CG5388-PB | 1..498 | 17..514 | 2490 | 100 | Plus |
CG5388-RA | 498 | CG5388-PA | 1..498 | 17..514 | 2490 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:11:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5388-RB | 1324 | CG5388-RB | 155..653 | 17..515 | 2495 | 100 | Plus |
CG5388-RA | 741 | CG5388-RA | 155..652 | 17..514 | 2490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:11:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22337122..22337619 | 514..17 | 2490 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:11:35 has no hits.
BS20953.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:04 Download gff for
BS20953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5388-RA | 155..652 | 17..514 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:02 Download gff for
BS20953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5388-RA | 155..652 | 17..514 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:58:18 Download gff for
BS20953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5388-RB | 155..652 | 17..514 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:58:18 Download gff for
BS20953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22337122..22337619 | 17..514 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:02 Download gff for
BS20953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18162844..18163341 | 17..514 | 100 | | Minus |
BS20953.pep Sequence
Translation from 16 to 513
> BS20953.pep
MPPVEVSIRQGVAFLGLYVLLLAALVRPQMNFSIFVDSFFLQVNHSVVMV
LSYRFDSYMAMAAAPLSAVTVFALSKWNERCENPSSRKLVIMGVTCLYVL
VLVANVLANGIVVQQALIRFDQCPYRAWYMYSQMAMSFIKSSIAEVQEVF
TGRPQRRSRLIYRLH*
BS20953.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5388-PB | 165 | CG5388-PB | 1..165 | 1..165 | 831 | 100 | Plus |
CG5388-PA | 165 | CG5388-PA | 1..165 | 1..165 | 831 | 100 | Plus |