BS20954.complete Sequence
683 bp assembled on 2011-01-18
GenBank Submission: KX806508
> BS20954.complete
GAAGTTATCAGTCGACATGTCAGCGATCACCATACGCGCCATGACAATCG
GGGATTACGAGGAGGTCGAGGCCTTTCTCGCAGTGCACTTCTTCAAGCAG
GAGCCGCTAATGCTGATCCCCCAGGAGGATCCCAAGCAGAGCGAGGTGTC
TTCCGCGGAGGCTGAGCTACACCGCTCGCTCATACCCCAGGATCTCTCCC
TGGTGGCCGTCGACGGGGAGCGCATTGTGGGCGTGGTTCTGGCCGGTGAA
TTGGTACCCGAGGATCTGGAGAGGGAGTACCAGGAGGCTGAGCAGAAGGA
GATCACGTGCCTGCTGGACAAGATACACAAGTTTCTGGCCGGGATCGAGC
GGCAGGCCAATATCTTCAAGCACTACGGAGTGGAGCGGGCGCTTTACCTG
TACATGCTCGGTGTGGACGTGTCCATTCGACGCCAGAGAGTGGGCACCCG
CCTGGTGGAGGCCACCATTGAGCTGGGTCGCCAGCGTGGATTTCCCGTCG
TCACATCTACCTGCAGCAACCAGAACTCCAAACGCCTTATGACCGCCCTA
AACATGGAGTGCATACTCACAAAGGATTACGCGGACTACAAGGACGAGCA
CGGGGAGATCGTCCTGCGGGCATCCGAGCCACACACCTCCGCCAGTGTCG
TGGCCATACGACTGTAAAAGCTTTCTAGACCAT
BS20954.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:11:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AANATL2-RB | 651 | CG9486-PB | 1..651 | 17..667 | 3255 | 100 | Plus |
| AANATL2-RA | 651 | CG9486-PA | 1..651 | 17..667 | 3255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:11:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AANATL2-RB | 964 | CG9486-RB | 18..668 | 17..667 | 3255 | 100 | Plus |
| AANATL2-RA | 857 | CG9486-RA | 18..668 | 17..667 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:11:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6255876..6256526 | 17..667 | 3255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:11:40 has no hits.
BS20954.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:05 Download gff for
BS20954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9486-RA | 18..666 | 17..665 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:04 Download gff for
BS20954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9486-RA | 18..666 | 17..665 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:58:20 Download gff for
BS20954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AANATL2-RA | 18..666 | 17..665 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:58:20 Download gff for
BS20954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6255876..6256524 | 17..665 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:04 Download gff for
BS20954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6255876..6256524 | 17..665 | 100 | | Plus |
BS20954.pep Sequence
Translation from 16 to 666
> BS20954.pep
MSAITIRAMTIGDYEEVEAFLAVHFFKQEPLMLIPQEDPKQSEVSSAEAE
LHRSLIPQDLSLVAVDGERIVGVVLAGELVPEDLEREYQEAEQKEITCLL
DKIHKFLAGIERQANIFKHYGVERALYLYMLGVDVSIRRQRVGTRLVEAT
IELGRQRGFPVVTSTCSNQNSKRLMTALNMECILTKDYADYKDEHGEIVL
RASEPHTSASVVAIRL*
BS20954.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AANATL2-PB | 216 | CG9486-PB | 1..216 | 1..216 | 1081 | 100 | Plus |
| AANATL2-PA | 216 | CG9486-PA | 1..216 | 1..216 | 1081 | 100 | Plus |
| CG10659-PA | 222 | CG10659-PA | 9..222 | 4..216 | 389 | 40.3 | Plus |
| CG18607-PA | 224 | CG18607-PA | 6..224 | 1..216 | 312 | 33.2 | Plus |
| CG10476-PA | 222 | CG10476-PA | 9..222 | 4..216 | 291 | 33.8 | Plus |
