BS20957.complete Sequence
542 bp assembled on 2011-01-18
GenBank Submission: KX806459
> BS20957.complete
GAAGTTATCAGTCGACATGTTGGCGGATAGTGCAACTTTGACTTTAGCTA
TCTTTGTAGGTACGTCTGTTGTGCTTGTTTCGGTTTCATCTTCAAGTTTG
TCGGAAATTAAGCCGATGAACAACGGACATATCGTGACGCCTTTGGGATG
CCATCGTCGTGTATACACGTATAAAGTGACACAGTCCGATCTTCAAGGAC
ACGAGTGTTGGGACTATGTAAGCGTTTGGTCGTGTTGGGGACGATGCGAC
TCAAGCGAAATTTCCGATTGGAAGTTTCCTTACAAGCGTTCGTTCCATCC
TGTTTGTGTCCACGCCCAGCGGCAGCTGGTAGTAGCTATCCTAAAGAATT
GTCACCCTAAAGCAGAGGACAGCGTAAGCAAGTACCAGTACATGGAGGCA
GTGAACTGTCACTGCCAGACGTGCTCCACACAGGATACCAGCTGCGAAGC
TCCGGCCAATAATGAAATGGCTGGGGGCAGCAGGGCAATCATGGTAGGCG
CCGATACCAAAAACTTGGACTATTAGAAGCTTTCTAGACCAT
BS20957.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:15:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gpb5-RA | 510 | CG40041-PA | 1..510 | 17..526 | 2550 | 100 | Plus |
| Gpb5-RC | 510 | CG40041-PC | 24..510 | 40..526 | 2435 | 100 | Plus |
| Gpb5-RD | 411 | CG40041-PD | 1..411 | 116..526 | 2055 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:15:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gpb5-RA | 657 | CG40041-RA | 31..540 | 17..526 | 2550 | 100 | Plus |
| Gpb5-RC | 734 | CG40041-RC | 131..617 | 40..526 | 2435 | 100 | Plus |
| Gpb5-RD | 697 | CG40041-RD | 102..580 | 48..526 | 2395 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:15:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 23311861..23312347 | 40..526 | 2435 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:15:48 has no hits.
BS20957.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:37 Download gff for
BS20957.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gpb5-RA | 51..555 | 22..526 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:00 Download gff for
BS20957.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gpb5-RA | 36..540 | 22..526 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:02 Download gff for
BS20957.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gpb5-RA | 36..540 | 22..526 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:02 Download gff for
BS20957.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 23311783..23311800 | 22..39 | 100 | -> | Plus |
| 2L | 23311861..23312347 | 40..526 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:00 Download gff for
BS20957.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2LHet | 167298..167315 | 22..39 | 100 | -> | Plus |
| 2LHet | 167376..167862 | 40..526 | 100 | | Plus |
BS20957.pep Sequence
Translation from 16 to 525
> BS20957.pep
MLADSATLTLAIFVGTSVVLVSVSSSSLSEIKPMNNGHIVTPLGCHRRVY
TYKVTQSDLQGHECWDYVSVWSCWGRCDSSEISDWKFPYKRSFHPVCVHA
QRQLVVAILKNCHPKAEDSVSKYQYMEAVNCHCQTCSTQDTSCEAPANNE
MAGGSRAIMVGADTKNLDY*
BS20957.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gpb5-PA | 169 | CG40041-PA | 1..169 | 1..169 | 918 | 100 | Plus |
| Gpb5-PC | 169 | CG40041-PC | 9..169 | 9..169 | 882 | 100 | Plus |
| Gpb5-PD | 136 | CG40041-PD | 1..136 | 34..169 | 771 | 100 | Plus |
