BS20959.complete Sequence
698 bp assembled on 2011-01-18
GenBank Submission: KX801119
> BS20959.complete
GAAGTTATCAGTCGACATGAGTGGTTCGCCATCGATGCCCCGTCGCCGCC
AGATCGGGCATACTTCCGGCCATTGTAATGTGCGCTGCGATGGCTGCGGC
AACAATAGGATGACCTTCTATCGCTACAAGTGCCTGCACTGCCTGGACTA
TGATCTTTGCTCCGACTGCAAGGAAAATGGGGTCTCAAACGGGTTGCACA
GTCTGGATCATCCGCTCCAGTGCCTAATGGATCGTGATGCACTTGAGCTG
CACTTCGCCGGTGAGCCGATTCCGATATTGTGCGCCGACAGCTTCACGTG
CCCAGTGTGCGGTGAAATGGGCTTTTCCGTAGAGGATCTGAGGACGCACT
GCCAAGATAATCATCGCATGGCGCGCACAGTTTGCATTTGCCCAGTCTGC
GCGGCGGTCCCATTGTCGCAACCGAGTCACATTGCTCACATTGCCAATCA
CTTGATGTTCTCGCCATCGCATCGCGCTACAGGGGATCCGATGATCGATA
TCAGCGCCACTTCCCAGGCTGAGGGCTCCAGTTTGCCCCAGAACTCTGCC
GTGAGCTCTGGATCTGGCGCTCAACACACTTTTTCCAGCTCGGAAAATTC
CCAGGTGCGCTTCCTTCTACCCGGAAACAGAGCTCCCTTAGCTGATTCCG
ACGATTTTAACATGGACAATTGGGAGGTATAAAAGCTTTCTAGACCAT
BS20959.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:11:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3526-RC | 666 | CG3526-PC | 1..666 | 17..682 | 3330 | 100 | Plus |
| CG3526-RA | 690 | CG3526-PA | 26..690 | 18..682 | 3325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:11:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3526-RC | 860 | CG3526-RC | 113..781 | 16..684 | 3345 | 100 | Plus |
| CG3526-RA | 1084 | CG3526-RA | 71..737 | 18..684 | 3335 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:11:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2893220..2893885 | 19..684 | 3330 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:11:15 has no hits.
BS20959.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:01 Download gff for
BS20959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3526-RC | 114..777 | 17..680 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:49:54 Download gff for
BS20959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3526-RC | 114..777 | 17..680 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:58:11 Download gff for
BS20959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3526-RC | 114..777 | 17..680 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:58:11 Download gff for
BS20959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2893219..2893881 | 17..680 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:49:54 Download gff for
BS20959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2787252..2787914 | 17..680 | 99 | | Plus |
BS20959.pep Sequence
Translation from 16 to 681
> BS20959.pep
MSGSPSMPRRRQIGHTSGHCNVRCDGCGNNRMTFYRYKCLHCLDYDLCSD
CKENGVSNGLHSLDHPLQCLMDRDALELHFAGEPIPILCADSFTCPVCGE
MGFSVEDLRTHCQDNHRMARTVCICPVCAAVPLSQPSHIAHIANHLMFSP
SHRATGDPMIDISATSQAEGSSLPQNSAVSSGSGAQHTFSSSENSQVRFL
LPGNRAPLADSDDFNMDNWEV*
BS20959.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:02:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3526-PC | 221 | CG3526-PC | 1..221 | 1..221 | 1219 | 100 | Plus |
| CG3526-PA | 229 | CG3526-PA | 9..229 | 1..221 | 1216 | 99.5 | Plus |
| CG11984-PI | 599 | CG11984-PI | 2..160 | 17..186 | 301 | 38 | Plus |
| CG11984-PH | 599 | CG11984-PH | 2..160 | 17..186 | 301 | 38 | Plus |
| CG11984-PG | 599 | CG11984-PG | 2..160 | 17..186 | 301 | 38 | Plus |
